RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RIMS2Q9UQ26 1411 aa29.26■■■□□ 2.27
RHBDD3-201ENST00000216085 SCAF11Q99590 1463 aaKnown RBP29.25■■■□□ 2.27
RHBDD3-201ENST00000216085 PPP1R15AO75807 674 aaPredicted RBP29.24■■■□□ 2.27
RHBDD3-201ENST00000216085 NEUROD1Q13562 356 aa29.24■■■□□ 2.27
RHBDD3-201ENST00000216085 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
RHBDD3-201ENST00000216085 TXNDC2Q86VQ3 553 aa29.23■■■□□ 2.27
RHBDD3-201ENST00000216085 ZFYVE9O95405 1425 aa29.22■■■□□ 2.27
RHBDD3-201ENST00000216085 POLR1AO95602 1720 aaPredicted RBP29.22■■■□□ 2.27
RHBDD3-201ENST00000216085 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.26
RHBDD3-201ENST00000216085 VGFO15240 615 aaPredicted RBP29.18■■■□□ 2.26
RHBDD3-201ENST00000216085 TONSLQ96HA7 1378 aa29.16■■■□□ 2.26
RHBDD3-201ENST00000216085 PPLO60437 1756 aa29.16■■■□□ 2.26
RHBDD3-201ENST00000216085 LTKP29376 864 aa29.16■■■□□ 2.26
RHBDD3-201ENST00000216085 NCKAP5LQ9HCH0 1330 aa29.16■■■□□ 2.26
RHBDD3-201ENST00000216085 STAC3Q96MF2 364 aa29.15■■■□□ 2.26
RHBDD3-201ENST00000216085 DMRT2Q9Y5R5 561 aa29.15■■■□□ 2.26
RHBDD3-201ENST00000216085 MED14O60244 1454 aa29.13■■■□□ 2.25
RHBDD3-201ENST00000216085 NUTM2DQ5VT03 806 aaPredicted RBP29.13■■■□□ 2.25
RHBDD3-201ENST00000216085 IFT172Q9UG01 1749 aa29.13■■■□□ 2.25
RHBDD3-201ENST00000216085 STRCQ7RTU9 1775 aa29.12■■■□□ 2.25
RHBDD3-201ENST00000216085 NPHP4O75161 1426 aaPredicted RBP29.12■■■□□ 2.25
RHBDD3-201ENST00000216085 PLEKHG1Q9ULL1 1385 aa29.12■■■□□ 2.25
RHBDD3-201ENST00000216085 BCANQ96GW7 911 aa29.12■■■□□ 2.25
RHBDD3-201ENST00000216085 MYOM2P54296 1465 aa29.11■■■□□ 2.25
RHBDD3-201ENST00000216085 DCAF11Q8TEB1 546 aa29.11■■■□□ 2.25
RHBDD3-201ENST00000216085 IQGAP1P46940 1657 aa29.09■■■□□ 2.25
RHBDD3-201ENST00000216085 TIMELESSQ9UNS1 1208 aa29.06■■■□□ 2.24
RHBDD3-201ENST00000216085 L3MBTL2Q969R5 705 aa29.05■■■□□ 2.24
RHBDD3-201ENST00000216085 KDM2AQ9Y2K7 1162 aa29.05■■■□□ 2.24
RHBDD3-201ENST00000216085 SETBP1Q9Y6X0 1596 aa29.03■■■□□ 2.24
RHBDD3-201ENST00000216085 ADGRF5Q8IZF2 1346 aa29.02■■■□□ 2.24
RHBDD3-201ENST00000216085 DIP2AQ14689 1571 aa29.01■■■□□ 2.23
RHBDD3-201ENST00000216085 NRXN1Q9ULB1 1477 aa29■■■□□ 2.23
RHBDD3-201ENST00000216085 PIK3C2GO75747 1445 aa29■■■□□ 2.23
RHBDD3-201ENST00000216085 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
RHBDD3-201ENST00000216085 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
RHBDD3-201ENST00000216085 LAMC1P11047 1609 aa28.95■■■□□ 2.22
RHBDD3-201ENST00000216085 NRXN3Q9Y4C0 1643 aa28.95■■■□□ 2.22
RHBDD3-201ENST00000216085 ADAMTS13Q76LX8 1427 aa28.94■■■□□ 2.22
RHBDD3-201ENST00000216085 TBX22Q9Y458 520 aa28.94■■■□□ 2.22
RHBDD3-201ENST00000216085 PRAG1Q86YV5 1406 aa28.93■■■□□ 2.22
RHBDD3-201ENST00000216085 ALKQ9UM73 1620 aa28.91■■■□□ 2.22
RHBDD3-201ENST00000216085 PIK3R4Q99570 1358 aa28.89■■■□□ 2.22
RHBDD3-201ENST00000216085 C14orf93Q9H972 538 aaKnown RBP28.88■■■□□ 2.21
RHBDD3-201ENST00000216085 KIAA1210Q9ULL0 1709 aa28.85■■■□□ 2.21
RHBDD3-201ENST00000216085 CFAP70Q5T0N1 1121 aa28.84■■■□□ 2.21
RHBDD3-201ENST00000216085 SETD1AO15047 1707 aaKnown RBP28.83■■■□□ 2.21
RHBDD3-201ENST00000216085 METP08581 1390 aa28.81■■■□□ 2.2
RHBDD3-201ENST00000216085 KCNA6P17658 529 aa28.79■■■□□ 2.2
RHBDD3-201ENST00000216085 ZNF335Q9H4Z2 1342 aaPredicted RBP28.77■■■□□ 2.2
RHBDD3-201ENST00000216085 NWD1Q149M9 1564 aa28.77■■■□□ 2.2
RHBDD3-201ENST00000216085 TRPM1Q7Z4N2 1603 aa28.77■■■□□ 2.2
RHBDD3-201ENST00000216085 CHD2O14647 1828 aaKnown RBP28.77■■■□□ 2.2
RHBDD3-201ENST00000216085 ROCK2O75116 1388 aaKnown RBP28.75■■■□□ 2.19
RHBDD3-201ENST00000216085 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
RHBDD3-201ENST00000216085 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
RHBDD3-201ENST00000216085 TMEM132EQ6IEE7 984 aa28.75■■■□□ 2.19
RHBDD3-201ENST00000216085 AMOTL2Q9Y2J4 779 aa28.75■■■□□ 2.19
RHBDD3-201ENST00000216085 CPS1P31327 1500 aa28.74■■■□□ 2.19
RHBDD3-201ENST00000216085 ASXL1Q8IXJ9 1541 aa28.74■■■□□ 2.19
RHBDD3-201ENST00000216085 ADGRB1O14514 1584 aa28.74■■■□□ 2.19
RHBDD3-201ENST00000216085 RALGAPBQ86X10 1494 aa28.74■■■□□ 2.19
RHBDD3-201ENST00000216085 LRPPRCP42704 1394 aaKnown RBP28.73■■■□□ 2.19
RHBDD3-201ENST00000216085 YTHDC2Q9H6S0 1430 aaKnown RBP28.73■■■□□ 2.19
RHBDD3-201ENST00000216085 XRN1Q8IZH2 1706 aaKnown RBP28.72■■■□□ 2.19
RHBDD3-201ENST00000216085 PTPRUQ92729 1446 aa28.72■■■□□ 2.19
RHBDD3-201ENST00000216085 STK26Q9P289 416 aa28.7■■■□□ 2.18
RHBDD3-201ENST00000216085 ABCC11Q96J66 1382 aa28.69■■■□□ 2.18
RHBDD3-201ENST00000216085 PTCH1Q13635 1447 aa28.68■■■□□ 2.18
RHBDD3-201ENST00000216085 NBPF1Q3BBV0 1214 aa28.68■■■□□ 2.18
RHBDD3-201ENST00000216085 TECPR2O15040 1411 aa28.68■■■□□ 2.18
RHBDD3-201ENST00000216085 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
RHBDD3-201ENST00000216085 ZEB1P37275 1124 aaPredicted RBP28.67■■■□□ 2.18
RHBDD3-201ENST00000216085 GPRASP1Q5JY77 1395 aa28.66■■■□□ 2.18
RHBDD3-201ENST00000216085 STRCP1A6NGW2 1772 aa28.66■■■□□ 2.18
RHBDD3-201ENST00000216085 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
RHBDD3-201ENST00000216085 CARD11Q9BXL7 1154 aa28.65■■■□□ 2.18
RHBDD3-201ENST00000216085 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
RHBDD3-201ENST00000216085 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
RHBDD3-201ENST00000216085 TRAK1Q9UPV9 953 aa28.62■■■□□ 2.17
RHBDD3-201ENST00000216085 EIF3AQ14152 1382 aaKnown RBP28.61■■■□□ 2.17
RHBDD3-201ENST00000216085 FAM135BQ49AJ0 1406 aa28.61■■■□□ 2.17
RHBDD3-201ENST00000216085 SIRT1Q96EB6 747 aa28.6■■■□□ 2.17
RHBDD3-201ENST00000216085 ROBO2Q9HCK4 1378 aa28.59■■■□□ 2.17
RHBDD3-201ENST00000216085 LRRC7Q96NW7 1537 aa28.59■■■□□ 2.17
RHBDD3-201ENST00000216085 POGKQ9P215 609 aa28.58■■■□□ 2.17
RHBDD3-201ENST00000216085 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
RHBDD3-201ENST00000216085 NCOA3Q9Y6Q9 1424 aa28.57■■■□□ 2.16
RHBDD3-201ENST00000216085 C14orf37Q86TY3 774 aa28.57■■■□□ 2.16
RHBDD3-201ENST00000216085 ARHGEF28Q8N1W1 1705 aaKnown RBP28.55■■■□□ 2.16
RHBDD3-201ENST00000216085 PRAM1Q96QH2 718 aa28.55■■■□□ 2.16
RHBDD3-201ENST00000216085 IQSEC2Q5JU85 1478 aa28.51■■■□□ 2.15
RHBDD3-201ENST00000216085 WAPLQ7Z5K2 1190 aa28.51■■■□□ 2.15
RHBDD3-201ENST00000216085 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
RHBDD3-201ENST00000216085 MSH6P52701 1360 aa28.49■■■□□ 2.15
RHBDD3-201ENST00000216085 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
RHBDD3-201ENST00000216085 ADGRL3Q9HAR2 1447 aa28.48■■■□□ 2.15
RHBDD3-201ENST00000216085 CERKQ8TCT0 537 aa28.48■■■□□ 2.15
RHBDD3-201ENST00000216085 USP47Q96K76 1375 aa28.47■■■□□ 2.15
RHBDD3-201ENST00000216085 PLEKHH1Q9ULM0 1364 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms