RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
PTPN18-201ENST00000175756 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
PTPN18-201ENST00000175756 PMFBP1Q8TBY8 1022 aa21.82■■□□□ 1.08
PTPN18-201ENST00000175756 SLC12A5Q9H2X9 1139 aa21.81■■□□□ 1.08
PTPN18-201ENST00000175756 MAPK8IP3Q9UPT6 1336 aa21.81■■□□□ 1.08
PTPN18-201ENST00000175756 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
PTPN18-201ENST00000175756 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
PTPN18-201ENST00000175756 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
PTPN18-201ENST00000175756 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
PTPN18-201ENST00000175756 AMER1Q5JTC6 1135 aaPredicted RBP21.8■■□□□ 1.08
PTPN18-201ENST00000175756 KIF14Q15058 1648 aa21.8■■□□□ 1.08
PTPN18-201ENST00000175756 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
PTPN18-201ENST00000175756 KANK1Q14678 1352 aa21.79■■□□□ 1.08
PTPN18-201ENST00000175756 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
PTPN18-201ENST00000175756 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
PTPN18-201ENST00000175756 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
PTPN18-201ENST00000175756 ATP10BO94823 1461 aa21.78■■□□□ 1.08
PTPN18-201ENST00000175756 KDM5CP41229 1560 aa21.78■■□□□ 1.08
PTPN18-201ENST00000175756 SEC24BO95487 1268 aa21.78■■□□□ 1.08
PTPN18-201ENST00000175756 MTHFSP49914 203 aa21.77■■□□□ 1.08
PTPN18-201ENST00000175756 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
PTPN18-201ENST00000175756 PDZRN3Q9UPQ7 1066 aa21.77■■□□□ 1.08
PTPN18-201ENST00000175756 TNNQ9UQP3 1299 aa21.76■■□□□ 1.07
PTPN18-201ENST00000175756 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
PTPN18-201ENST00000175756 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
PTPN18-201ENST00000175756 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
PTPN18-201ENST00000175756 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
PTPN18-201ENST00000175756 PRKCSHP14314 528 aaPredicted RBP21.74■■□□□ 1.07
PTPN18-201ENST00000175756 TSR2Q969E8 191 aaKnown RBP21.74■■□□□ 1.07
PTPN18-201ENST00000175756 MYH16Q9H6N6 1097 aa21.74■■□□□ 1.07
PTPN18-201ENST00000175756 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
PTPN18-201ENST00000175756 ELL2O00472 640 aaPredicted RBP21.72■■□□□ 1.07
PTPN18-201ENST00000175756 NCLP19338 710 aaKnown RBP21.72■■□□□ 1.07
PTPN18-201ENST00000175756 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
PTPN18-201ENST00000175756 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
PTPN18-201ENST00000175756 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
PTPN18-201ENST00000175756 RUNDC1Q96C34 613 aa21.71■■□□□ 1.07
PTPN18-201ENST00000175756 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
PTPN18-201ENST00000175756 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
PTPN18-201ENST00000175756 GOLGA6L3A6NEY3 463 aa21.71■■□□□ 1.07
PTPN18-201ENST00000175756 PDE3AQ14432 1141 aa21.7■■□□□ 1.07
PTPN18-201ENST00000175756 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.07
PTPN18-201ENST00000175756 FAM135AQ9P2D6 1515 aa21.7■■□□□ 1.06
PTPN18-201ENST00000175756 ZKSCAN2Q63HK3 967 aa21.69■■□□□ 1.06
PTPN18-201ENST00000175756 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
PTPN18-201ENST00000175756 APBB1O00213 710 aa21.68■■□□□ 1.06
PTPN18-201ENST00000175756 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
PTPN18-201ENST00000175756 ADGRL2O95490 1459 aa21.67■■□□□ 1.06
PTPN18-201ENST00000175756 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
PTPN18-201ENST00000175756 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
PTPN18-201ENST00000175756 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
PTPN18-201ENST00000175756 A2MP01023 1474 aa21.66■■□□□ 1.06
PTPN18-201ENST00000175756 ADGRF5Q8IZF2 1346 aa21.65■■□□□ 1.06
PTPN18-201ENST00000175756 LNPKQ9C0E8 428 aa21.65■■□□□ 1.06
PTPN18-201ENST00000175756 GGNBP2Q9H3C7 697 aa21.65■■□□□ 1.06
PTPN18-201ENST00000175756 PCDHB15Q9Y5E8 787 aa21.65■■□□□ 1.06
PTPN18-201ENST00000175756 C22orf23Q9BZE7 217 aa21.65■■□□□ 1.06
PTPN18-201ENST00000175756 ANP32BQ92688 251 aaKnown RBP21.64■■□□□ 1.06
PTPN18-201ENST00000175756 CABP2Q9NPB3 220 aa21.64■■□□□ 1.06
PTPN18-201ENST00000175756 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
PTPN18-201ENST00000175756 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.05
PTPN18-201ENST00000175756 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
PTPN18-201ENST00000175756 TPRNQ4KMQ1 711 aa21.63■■□□□ 1.05
PTPN18-201ENST00000175756 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
PTPN18-201ENST00000175756 COL17A1Q9UMD9 1497 aaPredicted RBP21.63■■□□□ 1.05
PTPN18-201ENST00000175756 RLBP1P12271 317 aa21.63■■□□□ 1.05
PTPN18-201ENST00000175756 EXOSC9Q06265 439 aaKnown RBP21.62■■□□□ 1.05
PTPN18-201ENST00000175756 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
PTPN18-201ENST00000175756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.59■■□□□ 1.054e-7■■■□□ 18.6
PTPN18-201ENST00000175756 TBC1D2Q9BYX2 928 aa21.59■■□□□ 1.05
PTPN18-201ENST00000175756 BLMP54132 1417 aaPredicted RBP21.59■■□□□ 1.05
PTPN18-201ENST00000175756 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
PTPN18-201ENST00000175756 SYCP2Q9BX26 1530 aa21.58■■□□□ 1.05
PTPN18-201ENST00000175756 RIPK4P57078 832 aa21.57■■□□□ 1.04
PTPN18-201ENST00000175756 MINK1Q8N4C8 1332 aaPredicted RBP21.56■■□□□ 1.04
PTPN18-201ENST00000175756 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
PTPN18-201ENST00000175756 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
PTPN18-201ENST00000175756 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
PTPN18-201ENST00000175756 CHMP5Q9NZZ3 219 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 SOX12O15370 315 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 TRAK2O60296 914 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 NSD3Q9BZ95 1437 aa21.54■■□□□ 1.04
PTPN18-201ENST00000175756 GOLGA6L22H0YM25 854 aa21.53■■□□□ 1.04
PTPN18-201ENST00000175756 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
PTPN18-201ENST00000175756 RSPH6AQ9H0K4 717 aa21.53■■□□□ 1.04
PTPN18-201ENST00000175756 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
PTPN18-201ENST00000175756 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
PTPN18-201ENST00000175756 DDX19BQ9UMR2 479 aa21.51■■□□□ 1.03
PTPN18-201ENST00000175756 GPRASP1Q5JY77 1395 aa21.51■■□□□ 1.03
PTPN18-201ENST00000175756 PLA2R1Q13018 1463 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 MCM4P33991 863 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 SCAF11Q99590 1463 aaKnown RBP21.5■■□□□ 1.03
PTPN18-201ENST00000175756 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 ZBTB7CA1YPR0 619 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 HMOX1P09601 288 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 FAM43AQ8N2R8 423 aa21.5■■□□□ 1.03
PTPN18-201ENST00000175756 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms