RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 KIF13AQ9H1H9 1805 aa15.68■□□□□ 0.1
TSPAN9-201ENST00000011898 INO80Q9ULG1 1556 aaPredicted RBP15.68■□□□□ 0.1
TSPAN9-201ENST00000011898 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
TSPAN9-201ENST00000011898 KDM5CP41229 1560 aa15.67■□□□□ 0.1
TSPAN9-201ENST00000011898 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
TSPAN9-201ENST00000011898 RGS3P49796 1198 aa15.66■□□□□ 0.1
TSPAN9-201ENST00000011898 ATP10AO60312 1499 aa15.65■□□□□ 0.1
TSPAN9-201ENST00000011898 NUDCQ9Y266 331 aa15.64■□□□□ 0.1
TSPAN9-201ENST00000011898 KDM6BO15054 1643 aa15.63■□□□□ 0.09
TSPAN9-201ENST00000011898 RCAN3Q9UKA8 241 aa15.63■□□□□ 0.09
TSPAN9-201ENST00000011898 RALBP1Q15311 655 aa15.62■□□□□ 0.09
TSPAN9-201ENST00000011898 AEBP2Q6ZN18 517 aaPredicted RBP15.62■□□□□ 0.09
TSPAN9-201ENST00000011898 PTMAP06454 111 aaKnown RBP15.62■□□□□ 0.09
TSPAN9-201ENST00000011898 A0A0G2JS52 829 aa15.61■□□□□ 0.09
TSPAN9-201ENST00000011898 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
TSPAN9-201ENST00000011898 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
TSPAN9-201ENST00000011898 KTN1Q86UP2 1357 aaKnown RBP15.61■□□□□ 0.09
TSPAN9-201ENST00000011898 KIDINS220Q9ULH0 1771 aa15.6■□□□□ 0.09
TSPAN9-201ENST00000011898 ZMYM4Q5VZL5 1548 aa15.6■□□□□ 0.09
TSPAN9-201ENST00000011898 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
TSPAN9-201ENST00000011898 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
TSPAN9-201ENST00000011898 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
TSPAN9-201ENST00000011898 RICTORQ6R327 1708 aa15.59■□□□□ 0.09
TSPAN9-201ENST00000011898 PPRC1Q5VV67 1664 aaKnown RBP15.59■□□□□ 0.09
TSPAN9-201ENST00000011898 FRAT1Q92837 279 aaPredicted RBP15.59■□□□□ 0.09
TSPAN9-201ENST00000011898 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
TSPAN9-201ENST00000011898 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
TSPAN9-201ENST00000011898 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
TSPAN9-201ENST00000011898 UBE2Q2Q8WVN8 375 aa15.58■□□□□ 0.08
TSPAN9-201ENST00000011898 PZPP20742 1482 aa15.58■□□□□ 0.08
TSPAN9-201ENST00000011898 GSE1Q14687 1217 aa15.58■□□□□ 0.08
TSPAN9-201ENST00000011898 GZF1Q9H116 711 aaPredicted RBP15.57■□□□□ 0.08
TSPAN9-201ENST00000011898 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
TSPAN9-201ENST00000011898 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
TSPAN9-201ENST00000011898 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
TSPAN9-201ENST00000011898 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
TSPAN9-201ENST00000011898 ABCA6Q8N139 1617 aa15.56■□□□□ 0.08
TSPAN9-201ENST00000011898 ZBED9Q6R2W3 1325 aa15.56■□□□□ 0.08
TSPAN9-201ENST00000011898 UNC13BO14795 1591 aa15.56■□□□□ 0.08
TSPAN9-201ENST00000011898 MSNP26038 577 aaKnown RBP15.55■□□□□ 0.08
TSPAN9-201ENST00000011898 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
TSPAN9-201ENST00000011898 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
TSPAN9-201ENST00000011898 ANKRD30BQ9BXX2 1392 aa15.53■□□□□ 0.08
TSPAN9-201ENST00000011898 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
TSPAN9-201ENST00000011898 BRPF3Q9ULD4 1205 aa15.53■□□□□ 0.08
TSPAN9-201ENST00000011898 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
TSPAN9-201ENST00000011898 FTSJ3Q8IY81 847 aaKnown RBP15.52■□□□□ 0.08
TSPAN9-201ENST00000011898 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.07
TSPAN9-201ENST00000011898 IQGAP3Q86VI3 1631 aa15.51■□□□□ 0.07
TSPAN9-201ENST00000011898 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
TSPAN9-201ENST00000011898 USP47Q96K76 1375 aa15.51■□□□□ 0.07
TSPAN9-201ENST00000011898 CCDC7Q96M83 1385 aa15.5■□□□□ 0.07
TSPAN9-201ENST00000011898 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
TSPAN9-201ENST00000011898 ZBTB7CA1YPR0 619 aa15.49■□□□□ 0.07
TSPAN9-201ENST00000011898 PRDM15P57071 1507 aaPredicted RBP15.49■□□□□ 0.07
TSPAN9-201ENST00000011898 SLKQ9H2G2 1235 aaPredicted RBP15.48■□□□□ 0.07
TSPAN9-201ENST00000011898 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
TSPAN9-201ENST00000011898 MYBBP1AQ9BQG0 1328 aaKnown RBP15.47■□□□□ 0.07
TSPAN9-201ENST00000011898 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
TSPAN9-201ENST00000011898 AGLP35573 1532 aa15.47■□□□□ 0.07
TSPAN9-201ENST00000011898 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
TSPAN9-201ENST00000011898 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
TSPAN9-201ENST00000011898 TET3O43151 1660 aa15.46■□□□□ 0.07
TSPAN9-201ENST00000011898 RNF17Q9BXT8 1623 aaKnown RBP15.46■□□□□ 0.07
TSPAN9-201ENST00000011898 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
TSPAN9-201ENST00000011898 MORC1Q86VD1 984 aa15.46■□□□□ 0.06
TSPAN9-201ENST00000011898 HAP1P54257 671 aaPredicted RBP15.45■□□□□ 0.06
TSPAN9-201ENST00000011898 RPRD2Q5VT52 1461 aaKnown RBP15.45■□□□□ 0.06
TSPAN9-201ENST00000011898 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
TSPAN9-201ENST00000011898 DEPDC5O75140 1603 aa15.44■□□□□ 0.06
TSPAN9-201ENST00000011898 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
TSPAN9-201ENST00000011898 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
TSPAN9-201ENST00000011898 PANK3Q9H999 370 aa15.44■□□□□ 0.06
TSPAN9-201ENST00000011898 SLC4A3P48751 1232 aa15.43■□□□□ 0.06
TSPAN9-201ENST00000011898 LMOD2Q6P5Q4 547 aa15.43■□□□□ 0.06
TSPAN9-201ENST00000011898 POGKQ9P215 609 aa15.43■□□□□ 0.06
TSPAN9-201ENST00000011898 ABCC3O15438 1527 aa15.43■□□□□ 0.06
TSPAN9-201ENST00000011898 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 MSH5O43196 834 aa15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
TSPAN9-201ENST00000011898 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
TSPAN9-201ENST00000011898 EFCAB6Q5THR3 1501 aa15.41■□□□□ 0.06
TSPAN9-201ENST00000011898 PLIN1O60240 522 aa15.41■□□□□ 0.06
TSPAN9-201ENST00000011898 PLCB2Q00722 1185 aa15.4■□□□□ 0.06
TSPAN9-201ENST00000011898 STAC3Q96MF2 364 aa15.4■□□□□ 0.06
TSPAN9-201ENST00000011898 NBPF8Q3BBV2 869 aa15.4■□□□□ 0.06
TSPAN9-201ENST00000011898 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
TSPAN9-201ENST00000011898 TNNT3P45378 269 aaPredicted RBP15.39■□□□□ 0.05
TSPAN9-201ENST00000011898 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
TSPAN9-201ENST00000011898 CEP152O94986 1710 aa15.39■□□□□ 0.05
TSPAN9-201ENST00000011898 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
TSPAN9-201ENST00000011898 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
TSPAN9-201ENST00000011898 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
TSPAN9-201ENST00000011898 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
TSPAN9-201ENST00000011898 TPRNQ4KMQ1 711 aa15.38■□□□□ 0.05
TSPAN9-201ENST00000011898 NPATQ14207 1427 aa15.38■□□□□ 0.05
TSPAN9-201ENST00000011898 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms