RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ST20-MTHFSA0A0A6YYL1 179 aa14.66□□□□□ -0.06
CD4-201ENST00000011653 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
CD4-201ENST00000011653 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
CD4-201ENST00000011653 SYNMO15061 1565 aa14.65□□□□□ -0.06
CD4-201ENST00000011653 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
CD4-201ENST00000011653 SAFB2Q14151 953 aaKnown RBP eCLIP14.65□□□□□ -0.06
CD4-201ENST00000011653 PRAG1Q86YV5 1406 aa14.64□□□□□ -0.07
CD4-201ENST00000011653 USP47Q96K76 1375 aa14.64□□□□□ -0.07
CD4-201ENST00000011653 VGFO15240 615 aaPredicted RBP14.63□□□□□ -0.07
CD4-201ENST00000011653 TRAK1Q9UPV9 953 aa14.63□□□□□ -0.07
CD4-201ENST00000011653 PREX1Q8TCU6 1659 aa14.63□□□□□ -0.07
CD4-201ENST00000011653 KIF1BO60333 1816 aa14.63□□□□□ -0.07
CD4-201ENST00000011653 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
CD4-201ENST00000011653 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
CD4-201ENST00000011653 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
CD4-201ENST00000011653 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
CD4-201ENST00000011653 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
CD4-201ENST00000011653 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
CD4-201ENST00000011653 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.08
CD4-201ENST00000011653 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
CD4-201ENST00000011653 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
CD4-201ENST00000011653 MYO5BQ9ULV0 1848 aa14.57□□□□□ -0.08
CD4-201ENST00000011653 ADGRB3O60242 1522 aa14.56□□□□□ -0.08
CD4-201ENST00000011653 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
CD4-201ENST00000011653 RPGRIP1LQ68CZ1 1315 aa14.56□□□□□ -0.08
CD4-201ENST00000011653 RALGAPBQ86X10 1494 aa14.56□□□□□ -0.08
CD4-201ENST00000011653 LTKP29376 864 aa14.55□□□□□ -0.08
CD4-201ENST00000011653 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
CD4-201ENST00000011653 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
CD4-201ENST00000011653 SPATA31D1Q6ZQQ2 1576 aa14.54□□□□□ -0.08
CD4-201ENST00000011653 A2ML1A8K2U0 1454 aa14.54□□□□□ -0.08
CD4-201ENST00000011653 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
CD4-201ENST00000011653 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
CD4-201ENST00000011653 C3P01024 1663 aa14.53□□□□□ -0.08
CD4-201ENST00000011653 C14orf93Q9H972 538 aaKnown RBP14.53□□□□□ -0.08
CD4-201ENST00000011653 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.08
CD4-201ENST00000011653 HSPA2P54652 639 aa14.52□□□□□ -0.08
CD4-201ENST00000011653 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.09
CD4-201ENST00000011653 HDGFP51858 240 aaKnown RBP14.51□□□□□ -0.09
CD4-201ENST00000011653 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
CD4-201ENST00000011653 TMEM131LA2VDJ0 1609 aa14.51□□□□□ -0.09
CD4-201ENST00000011653 POGKQ9P215 609 aa14.5□□□□□ -0.09
CD4-201ENST00000011653 KDM4FA0A1W2PPD8 638 aa14.5□□□□□ -0.09
CD4-201ENST00000011653 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
CD4-201ENST00000011653 TRPM1Q7Z4N2 1603 aa14.49□□□□□ -0.09
CD4-201ENST00000011653 NEXMIFQ5QGS0 1516 aa14.49□□□□□ -0.09
CD4-201ENST00000011653 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
CD4-201ENST00000011653 WAPLQ7Z5K2 1190 aa14.48□□□□□ -0.09
CD4-201ENST00000011653 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
CD4-201ENST00000011653 PIK3C2GO75747 1445 aa14.48□□□□□ -0.09
CD4-201ENST00000011653 PTPRMP28827 1452 aa14.47□□□□□ -0.09
CD4-201ENST00000011653 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
CD4-201ENST00000011653 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
CD4-201ENST00000011653 PRAM1Q96QH2 718 aa14.47□□□□□ -0.09
CD4-201ENST00000011653 TMF1P82094 1093 aa14.46□□□□□ -0.09
CD4-201ENST00000011653 MYOM2P54296 1465 aa14.46□□□□□ -0.09
CD4-201ENST00000011653 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
CD4-201ENST00000011653 ANP32CO43423 234 aa14.46□□□□□ -0.09
CD4-201ENST00000011653 PPLO60437 1756 aa14.46□□□□□ -0.1
CD4-201ENST00000011653 TESK2Q96S53 571 aa14.46□□□□□ -0.1
CD4-201ENST00000011653 CENPJQ9HC77 1338 aaPredicted RBP14.45□□□□□ -0.1
CD4-201ENST00000011653 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
CD4-201ENST00000011653 TMC1Q8TDI8 760 aa14.45□□□□□ -0.1
CD4-201ENST00000011653 GPRASP1Q5JY77 1395 aa14.45□□□□□ -0.1
CD4-201ENST00000011653 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
CD4-201ENST00000011653 NCKAP5LQ9HCH0 1330 aa14.44□□□□□ -0.1
CD4-201ENST00000011653 ANKLE2Q86XL3 938 aa14.44□□□□□ -0.1
CD4-201ENST00000011653 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
CD4-201ENST00000011653 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
CD4-201ENST00000011653 NLRP1Q9C000 1473 aa14.44□□□□□ -0.1
CD4-201ENST00000011653 METP08581 1390 aa14.43□□□□□ -0.1
CD4-201ENST00000011653 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
CD4-201ENST00000011653 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
CD4-201ENST00000011653 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
CD4-201ENST00000011653 ZFYVE9O95405 1425 aa14.41□□□□□ -0.1
CD4-201ENST00000011653 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
CD4-201ENST00000011653 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
CD4-201ENST00000011653 UBR1Q8IWV7 1749 aa14.4□□□□□ -0.1
CD4-201ENST00000011653 NRXN1Q9ULB1 1477 aa14.4□□□□□ -0.1
CD4-201ENST00000011653 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
CD4-201ENST00000011653 NEFLP07196 543 aa14.39□□□□□ -0.11
CD4-201ENST00000011653 FKBP8Q14318 412 aa14.39□□□□□ -0.11
CD4-201ENST00000011653 SETD1BQ9UPS6 1966 aaKnown RBP14.39□□□□□ -0.11
CD4-201ENST00000011653 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
CD4-201ENST00000011653 AMOTL2Q9Y2J4 779 aa14.38□□□□□ -0.11
CD4-201ENST00000011653 CEP170BQ9Y4F5 1589 aaPredicted RBP14.38□□□□□ -0.11
CD4-201ENST00000011653 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
CD4-201ENST00000011653 MYO3AQ8NEV4 1616 aa14.38□□□□□ -0.11
CD4-201ENST00000011653 ALKQ9UM73 1620 aa14.38□□□□□ -0.11
CD4-201ENST00000011653 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
CD4-201ENST00000011653 PANK3Q9H999 370 aa14.37□□□□□ -0.11
CD4-201ENST00000011653 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
CD4-201ENST00000011653 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
CD4-201ENST00000011653 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
CD4-201ENST00000011653 ADGRB1O14514 1584 aa14.35□□□□□ -0.11
CD4-201ENST00000011653 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
CD4-201ENST00000011653 KCNA6P17658 529 aa14.34□□□□□ -0.11
CD4-201ENST00000011653 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CD4-201ENST00000011653 ASXL1Q8IXJ9 1541 aa14.34□□□□□ -0.11
CD4-201ENST00000011653 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms