RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 TNNQ9UQP3 1299 aa17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 ATP10BO94823 1461 aa17.31■□□□□ 0.36
SEMA3F-201ENST00000002829 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
SEMA3F-201ENST00000002829 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
SEMA3F-201ENST00000002829 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
SEMA3F-201ENST00000002829 PZPP20742 1482 aa17.29■□□□□ 0.36
SEMA3F-201ENST00000002829 TESK2Q96S53 571 aa17.28■□□□□ 0.36
SEMA3F-201ENST00000002829 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
SEMA3F-201ENST00000002829 E9PSI1 815 aa17.28■□□□□ 0.36
SEMA3F-201ENST00000002829 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
SEMA3F-201ENST00000002829 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
SEMA3F-201ENST00000002829 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
SEMA3F-201ENST00000002829 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
SEMA3F-201ENST00000002829 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
SEMA3F-201ENST00000002829 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
SEMA3F-201ENST00000002829 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
SEMA3F-201ENST00000002829 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
SEMA3F-201ENST00000002829 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 RIPK4P57078 832 aa17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 LTV1Q96GA3 475 aaPredicted RBP17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
SEMA3F-201ENST00000002829 TEX14Q8IWB6 1497 aa17.23■□□□□ 0.35
SEMA3F-201ENST00000002829 WDR62O43379 1518 aa17.23■□□□□ 0.35
SEMA3F-201ENST00000002829 EXOSC9Q06265 439 aaKnown RBP17.22■□□□□ 0.35
SEMA3F-201ENST00000002829 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
SEMA3F-201ENST00000002829 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
SEMA3F-201ENST00000002829 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
SEMA3F-201ENST00000002829 IGHDP01880 384 aa17.2■□□□□ 0.34
SEMA3F-201ENST00000002829 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
SEMA3F-201ENST00000002829 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
SEMA3F-201ENST00000002829 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
SEMA3F-201ENST00000002829 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
SEMA3F-201ENST00000002829 KIF14Q15058 1648 aa17.18■□□□□ 0.34
SEMA3F-201ENST00000002829 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
SEMA3F-201ENST00000002829 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
SEMA3F-201ENST00000002829 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
SEMA3F-201ENST00000002829 MS4A1P11836 297 aa17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
SEMA3F-201ENST00000002829 RAPGEF6Q8TEU7 1601 aa17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
SEMA3F-201ENST00000002829 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
SEMA3F-201ENST00000002829 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
SEMA3F-201ENST00000002829 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
SEMA3F-201ENST00000002829 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 TRAPPC8Q9Y2L5 1435 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 KIAA0556O60303 1618 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
SEMA3F-201ENST00000002829 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
SEMA3F-201ENST00000002829 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
SEMA3F-201ENST00000002829 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SEMA3F-201ENST00000002829 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
SEMA3F-201ENST00000002829 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 PRAG1Q86YV5 1406 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 SEC24BO95487 1268 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
SEMA3F-201ENST00000002829 GOLGA6L3A6NEY3 463 aa17.1■□□□□ 0.33
SEMA3F-201ENST00000002829 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
SEMA3F-201ENST00000002829 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
SEMA3F-201ENST00000002829 RLBP1P12271 317 aa17.09■□□□□ 0.33
SEMA3F-201ENST00000002829 A0A0G2JS52 829 aa17.08■□□□□ 0.32
SEMA3F-201ENST00000002829 ANP32BQ92688 251 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-201ENST00000002829 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.32
SEMA3F-201ENST00000002829 IDI1Q13907 227 aa17.07■□□□□ 0.32
SEMA3F-201ENST00000002829 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
SEMA3F-201ENST00000002829 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
SEMA3F-201ENST00000002829 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
SEMA3F-201ENST00000002829 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
SEMA3F-201ENST00000002829 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms