RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 Ccdc27Q3V036 639 aa12.64□□□□□ -0.39
Msh4-203ENSMUST00000188338 Speer4f1Q9D5Q6 258 aa12.64□□□□□ -0.39
Msh4-203ENSMUST00000188338 Adgrl2Q8JZZ7 1487 aa12.64□□□□□ -0.39
Msh4-203ENSMUST00000188338 DroshaQ5HZJ0 1373 aaKnown RBP12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Arid3cA6PWV5 409 aa12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Gm20521D3Z5F7 333 aa12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Kif3bQ61771 747 aa12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Fan1Q69ZT1 1020 aa12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Prkrip1Q9CWV6 186 aaKnown RBP12.63□□□□□ -0.39
Msh4-203ENSMUST00000188338 Dcaf11Q91VU6 549 aa12.62□□□□□ -0.39
Msh4-203ENSMUST00000188338 Fbxo3Q9DC63 480 aa12.62□□□□□ -0.39
Msh4-203ENSMUST00000188338 Adamts13Q769J6 1426 aa12.62□□□□□ -0.39
Msh4-203ENSMUST00000188338 Gm32742A0A1B0GT42 1604 aa12.62□□□□□ -0.39
Msh4-203ENSMUST00000188338 Cep170Q6A065 1588 aa12.62□□□□□ -0.39
Msh4-203ENSMUST00000188338 Upf2A2AT37 1269 aaKnown RBP12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Fam184bQ0KK56 942 aa12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Znf608Q56A10 1511 aa12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Gm14025A2AP89 1413 aa12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Fgd6Q69ZL1 1399 aa12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Gas2l2Q5SSG4 860 aa12.61□□□□□ -0.39
Msh4-203ENSMUST00000188338 Kif7B7ZNG0 1348 aa12.6□□□□□ -0.39
Msh4-203ENSMUST00000188338 Edc4Q3UJB9 1406 aaKnown RBP12.6□□□□□ -0.39
Msh4-203ENSMUST00000188338 Tubgcp6G5E8P0 1769 aa12.6□□□□□ -0.39
Msh4-203ENSMUST00000188338 AI481877A2ALV5 1481 aa12.6□□□□□ -0.39
Msh4-203ENSMUST00000188338 Polr3glQ8R0C0 218 aa12.6□□□□□ -0.39
Msh4-203ENSMUST00000188338 Rangap1P46061 589 aaKnown RBP12.59□□□□□ -0.39
Msh4-203ENSMUST00000188338 Podxl2Q8CAE9 603 aa12.59□□□□□ -0.39
Msh4-203ENSMUST00000188338 Trim26Q99PN3 545 aa12.59□□□□□ -0.39
Msh4-203ENSMUST00000188338 Plch2A2AP18 1501 aa12.59□□□□□ -0.39
Msh4-203ENSMUST00000188338 CanxP35564 591 aaKnown RBP12.59□□□□□ -0.39
Msh4-203ENSMUST00000188338 DaxxO35613 739 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 Znf326O88291 580 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 Cdc42bpbQ7TT50 1713 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 Armcx1Q9CX83 456 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 4930567H17RikQ3V0K5 233 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 Tulp4Q9JIL5 1547 aa12.58□□□□□ -0.4
Msh4-203ENSMUST00000188338 Rrbp1Q99PL5 1605 aaKnown RBP12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Rbm10Q99KG3 930 aaKnown RBP12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Rwdd1Q9CQK7 243 aa12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Prdm16A2A935 1275 aa12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Iqcf3Q9D498 203 aa12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Tspyl2Q7TQI8 677 aa12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Usp40Q8BWR4 1235 aa12.57□□□□□ -0.4
Msh4-203ENSMUST00000188338 Gapvd1Q6PAR5 1458 aa12.56□□□□□ -0.4
Msh4-203ENSMUST00000188338 Rab3gap2Q8BMG7 1366 aa12.56□□□□□ -0.4
Msh4-203ENSMUST00000188338 Atp10dQ8K2X1 1416 aa12.56□□□□□ -0.4
Msh4-203ENSMUST00000188338 Srpk2O54781 681 aaKnown RBP12.56□□□□□ -0.4
Msh4-203ENSMUST00000188338 Chmp5Q9D7S9 219 aa12.56□□□□□ -0.4
Msh4-203ENSMUST00000188338 Tex14Q7M6U3 1450 aa12.55□□□□□ -0.4
Msh4-203ENSMUST00000188338 Mast1Q9R1L5 1570 aa12.55□□□□□ -0.4
Msh4-203ENSMUST00000188338 Tshz2Q68FE9 1030 aa12.55□□□□□ -0.4
Msh4-203ENSMUST00000188338 Gtf2e1Q9D0D5 440 aa12.55□□□□□ -0.4
Msh4-203ENSMUST00000188338 Usp54Q8BL06 1588 aaKnown RBP12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 PtprtQ99M80 1454 aa12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 Gm16486A0A1D5RMD1 1434 aa12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 Ccdc30Q8BVF4 654 aa12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 Setd1aE9PYH6 1716 aa12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 4933416C03RikQ3V063 378 aa12.54□□□□□ -0.4
Msh4-203ENSMUST00000188338 Atxn3Q9CVD2 355 aa12.53□□□□□ -0.4
Msh4-203ENSMUST00000188338 Sart3Q9JLI8 962 aaKnown RBP12.53□□□□□ -0.4
Msh4-203ENSMUST00000188338 Abcc6Q9R1S7 1498 aa12.53□□□□□ -0.4
Msh4-203ENSMUST00000188338 Rnf17Q99MV7 1640 aa12.53□□□□□ -0.4
Msh4-203ENSMUST00000188338 Pank1Q8K4K6 548 aa12.52□□□□□ -0.4
Msh4-203ENSMUST00000188338 Chd1P40201 1711 aa12.52□□□□□ -0.4
Msh4-203ENSMUST00000188338 Trim30dE9PWL0 497 aa12.52□□□□□ -0.41
Msh4-203ENSMUST00000188338 Vgll3P85442 326 aa12.52□□□□□ -0.41
Msh4-203ENSMUST00000188338 Golga2Q921M4 999 aa12.51□□□□□ -0.41
Msh4-203ENSMUST00000188338 Hsp90aa1P07901 733 aaKnown RBP12.51□□□□□ -0.41
Msh4-203ENSMUST00000188338 Irx6Q9ER75 438 aa12.51□□□□□ -0.41
Msh4-203ENSMUST00000188338 Gtf3c3Q3TMP1 882 aa12.5□□□□□ -0.41
Msh4-203ENSMUST00000188338 Zranb1Q7M760 708 aa12.5□□□□□ -0.41
Msh4-203ENSMUST00000188338 Kdm2bQ6P1G2 1309 aa12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 Plekhh1Q80TI1 1356 aa12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 Nsd2Q8BVE8 1365 aa12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 ShprhQ7TPQ3 1674 aa12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 Kif1bQ60575 1816 aaKnown RBP12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 Abcc1O35379 1528 aa12.49□□□□□ -0.41
Msh4-203ENSMUST00000188338 AdgbG3UZ78 1657 aa12.48□□□□□ -0.41
Msh4-203ENSMUST00000188338 EspnQ9ET47 871 aa12.48□□□□□ -0.41
Msh4-203ENSMUST00000188338 Usp19Q3UJD6 1360 aa12.48□□□□□ -0.41
Msh4-203ENSMUST00000188338 Ppip5k1A2ARP1 1436 aa12.48□□□□□ -0.41
Msh4-203ENSMUST00000188338 Eif2s2Q99L45 331 aaKnown RBP12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 Cfap74Q3UY96 1578 aa12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 Nkx1-2P42580 305 aa12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 Ttc21bQ0HA38 1315 aa12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 Mink1Q9JM52 1308 aa12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 ErbinQ80TH2 1402 aa12.47□□□□□ -0.41
Msh4-203ENSMUST00000188338 NudcO35685 332 aaKnown RBP12.46□□□□□ -0.41
Msh4-203ENSMUST00000188338 Skap1Q3UUV5 355 aa12.46□□□□□ -0.41
Msh4-203ENSMUST00000188338 Senp3Q9EP97 568 aaKnown RBP12.46□□□□□ -0.41
Msh4-203ENSMUST00000188338 Robo2Q7TPD3 1470 aa12.46□□□□□ -0.41
Msh4-203ENSMUST00000188338 Abcc3B2RX12 1523 aa12.46□□□□□ -0.41
Msh4-203ENSMUST00000188338 Stag3O70576 1240 aa12.46□□□□□ -0.42
Msh4-203ENSMUST00000188338 Apaf1O88879 1249 aa12.46□□□□□ -0.42
Msh4-203ENSMUST00000188338 Sbno1Q689Z5 1390 aa12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 NhsB1AV60 1647 aa12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 Pdcd11Q6NS46 1862 aaKnown RBP12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 Stk26Q99JT2 416 aa12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 Puf60Q3UEB3 564 aaKnown RBP12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 Atp1b4Q99ME6 356 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms