RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Ptcd1Q8C2E4 695 aaKnown RBP9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Unc5aQ8K1S4 898 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Ildr2B5TVM2 661 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Masp1P98064 704 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Map3k7Q62073 579 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Plekhg3Q4VAC9 1341 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Zfp777B9EKF4 885 aa9.07□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Dab2P98078 766 aa9.07□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Prr18Q6PAN7 307 aa9.07□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Setd1bQ8CFT2 1985 aa9.07□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Psme1P97371 249 aa9.06□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Znf710Q3U288 666 aa9.06□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Gm20521D3Z5F7 333 aa9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Ppp1r18Q8BQ30 594 aa9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Nob1Q8BW10 403 aa9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Top2aQ01320 1528 aaKnown RBP9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Map3k10Q66L42 940 aa9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Dnajc14Q921R4 703 aa9.05□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Soga1E1U8D0 1418 aa9.04□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Setbp1Q9Z180 1582 aa9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Upf2A2AT37 1269 aaKnown RBP9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Ccdc34Q3UI66 367 aa9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Scaf8Q6DID3 1268 aa9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Fkbp15Q6P9Q6 1216 aaKnown RBP9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 ClmQ7TSN2 230 aa9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Themis2Q91YX0 663 aa9.03□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Gpatch8A2A6A1 1505 aa9.02□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Atf4Q06507 349 aa9.02□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Foxd4Q60688 444 aa9.02□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Clcn6O35454 870 aa9.01□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Pla2r1Q62028 1487 aa9.01□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Tbc1d12Q6A039 696 aa9.01□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Mfsd10Q9D2V8 456 aaKnown RBP9.01□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 C1qbpO35658 278 aa9□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Arih1Q9Z1K5 555 aa9□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Spaca7Q9D2S4 182 aa9□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Fbxo3Q9DC63 480 aa9□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Speer3W4VSP1 261 aa9□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 AampJ3QN89 436 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Fbxo31Q3TQF0 507 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Tmc3Q7TQ69 1130 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 NrkQ9R0G8 1455 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Gm14025A2AP89 1413 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Chd1P40201 1711 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Neo1P97798 1493 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Slc5a4bQ91ZP4 660 aa8.99□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Anp32aO35381 247 aa8.98□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Sall2Q9QX96 1004 aa8.98□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 JmyQ9QXM1 983 aa8.98□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 AI481877A2ALV5 1481 aa8.98□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Znf326O88291 580 aa8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Tsr1Q5SWD9 803 aa8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Tnnt3Q9QZ47 272 aa8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 SynmQ70IV5 1561 aa8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Tfip11Q9ERA6 838 aaKnown RBP8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Dnmt1P13864 1620 aaKnown RBP8.97□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 EprsQ8CGC7 1512 aaKnown RBP8.96□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Arhgap27A2AB59 869 aa8.96□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Ano8Q6PB70 1060 aa8.96□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Aebp2Q9Z248 504 aaKnown RBP8.96□□□□□ -0.97
Ccdc38-203ENSMUST00000132214 Pola2P33611 600 aa8.95□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 4933416C03RikQ3V063 378 aa8.95□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Map3k4O08648 1597 aa8.95□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 March10E9PX79 788 aa8.95□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Cep57l1Q8VDS7 400 aa8.95□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 NeflP08551 543 aa8.94□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Rbm10Q99KG3 930 aaKnown RBP8.94□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 TchhA0A0B4J1F9 1599 aa8.94□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Shroom4Q1W617 1475 aa8.94□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Ak9G3UYQ4 1894 aa8.93□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 NefmP08553 848 aa8.93□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Myt1lP97500 1187 aa8.93□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Nop58Q6DFW4 536 aaKnown RBP8.93□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 BC005561E9Q5E2 1589 aa8.93□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Myo1bP46735 1107 aa8.92□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Abcc2Q8VI47 1543 aa8.92□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Arhgef11Q68FM7 1552 aa8.92□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Clasp1Q80TV8 1535 aaKnown RBP8.92□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 AdgbG3UZ78 1657 aa8.91□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Arhgef12Q8R4H2 1543 aaKnown RBP8.91□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 SnrkQ8VDU5 748 aa8.91□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Retreg3Q9CQV4 466 aa8.91□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 LrgukQ9D5S7 820 aa8.91□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 PxdnQ3UQ28 1475 aa8.9□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 OplahQ8K010 1288 aa8.9□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Abca16E9PWJ7 1678 aa8.9□□□□□ -0.98
Ccdc38-203ENSMUST00000132214 Mllt6B1AR10 1109 aa8.89□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Farp1F8VPU2 1048 aa8.89□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 TMEM121BQ99MX7 572 aa8.89□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Mapkbp1Q6NS57 1503 aa8.89□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Ttc37F8VPK0 1563 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Ccdc27Q3V036 639 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Gjc2Q8BQU6 440 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Pdcl3Q8BVF2 240 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Stard8Q8K031 1019 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Dnttip2Q8R2M2 758 aaKnown RBP8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 FcrlaQ920A9 352 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 OatP29758 439 aa8.88□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Mkrn1Q9QXP6 481 aa8.87□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 WizO88286 1684 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms