RNA–Protein interactions for RNA: ENSMUST00000063838.10

Fam49b-201, Transcript of Protein FAM49B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam49b, Length 3,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam49b-201ENSMUST00000063838 GsdmaQ9EST1 446 aa16.67■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Gtf3c3Q3TMP1 882 aa16.66■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Kif21aQ9QXL2 1672 aa16.65■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Shq1Q7TMX5 569 aa16.65■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Ccdc60Q8C4J0 545 aa16.65■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Rfx7F8VPJ6 1459 aa16.64■□□□□ 0.26
Fam49b-201ENSMUST00000063838 Chmp4cQ9D7F7 232 aa16.64■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Utp14aQ640M1 767 aaKnown RBP16.64■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Atp7aQ64430 1491 aa16.63■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Ythdc1E9Q5K9 736 aaKnown RBP16.62■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Rfx1P48377 963 aa16.62■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Adcy10Q8C0T9 1614 aa16.62■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Fgd1P52734 960 aa16.62■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Sox12Q04890 314 aa16.62■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Mbd3Q9Z2D8 285 aaKnown RBP16.61■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Shroom2A2ALU4 1481 aa16.61■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Cc2d1aQ8K1A6 943 aa16.6■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Q9D9H8 365 aa16.6■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Rab3gap2Q8BMG7 1366 aa16.6■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Aplp1Q03157 653 aa16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 AlkP97793 1621 aa16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Ssh2Q5SW75 1423 aa16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Ccdc183A2AJB1 534 aa16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Dnttip2Q8R2M2 758 aaKnown RBP16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Kank1E9Q238 1360 aa16.59■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Polr3aB2RXC6 1390 aa16.58■□□□□ 0.25
Fam49b-201ENSMUST00000063838 Tnnt1O88346 262 aa16.57■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Camsap2Q8C1B1 1461 aa16.57■□□□□ 0.24
Fam49b-201ENSMUST00000063838 SphkapQ6NSW3 1687 aa16.57■□□□□ 0.24
Fam49b-201ENSMUST00000063838 ErbinQ80TH2 1402 aa16.57■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Kdm3bQ6ZPY7 1562 aa16.56■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Ccdc146E9Q9F7 977 aa16.56■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Ppp1r3fQ9JIG4 799 aa16.56■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Naip6Q9JIB6 1403 aa16.55■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Znf692Q3U381 531 aa16.55■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Ppp1r18Q8BQ30 594 aa16.55■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Tnpo1Q8BFY9 898 aaKnown RBP16.54■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Peg3Q3URU2 1571 aa16.54■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Rapgef6Q5NCJ1 1609 aa16.54■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Plekhh1Q80TI1 1356 aa16.54■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Pnmal2G3X9N3 661 aa16.53■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Dusp27Q148W8 1138 aa16.53■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Trim58Q5NCC9 485 aa16.53■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Ralbp1Q62172 648 aa16.52■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Ccar1Q8CH18 1146 aaKnown RBP16.52■□□□□ 0.24
Fam49b-201ENSMUST00000063838 Asxl1P59598 1514 aa16.51■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Fgd6Q69ZL1 1399 aa16.5■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Gm14025A2AP89 1413 aa16.5■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Kif14L0N7N1 1674 aaKnown RBP16.49■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Htatsf1Q8BGC0 757 aa16.49■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Safb2Q80YR5 991 aaKnown RBP16.49■□□□□ 0.23
Fam49b-201ENSMUST00000063838 RalgapbQ8BQZ4 1484 aa16.48■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Prdm16A2A935 1275 aa16.48■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Ttc21bQ0HA38 1315 aa16.48■□□□□ 0.23
Fam49b-201ENSMUST00000063838 G3bp1P97855 465 aaKnown RBP16.48■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Txndc2Q6P902 515 aa16.48■□□□□ 0.23
Fam49b-201ENSMUST00000063838 SlkO54988 1233 aa16.47■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Smc5Q8CG46 1101 aaKnown RBP16.47■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Atp2b2Q9R0K7 1198 aa16.47■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Pprc1Q6NZN1 1644 aa16.46■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Rbm25B2RY56 838 aaKnown RBP16.46■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Abca5Q8K448 1642 aa16.46■□□□□ 0.23
Fam49b-201ENSMUST00000063838 Mcm10Q0VBD2 885 aa16.45■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Nsd2Q8BVE8 1365 aa16.45■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Mre11Q61216 706 aa16.45■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Rlbp1Q9Z275 317 aa16.45■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Duxf3A0A0N4SV92 674 aa16.44■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Cog6Q8R3I3 657 aa16.44■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Mlh3A0A1Y7VMP7 1443 aa16.44■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Ccdc9Q8VC31 543 aaKnown RBP16.43■□□□□ 0.22
Fam49b-201ENSMUST00000063838 CenpjQ569L8 1344 aa16.43■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Triml2E9PW10 424 aa16.42■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Nkx1-2P42580 305 aa16.42■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Fam135aQ6NS59 1506 aa16.42■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Cald1E9QA15 768 aaKnown RBP16.42■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Taok2Q6ZQ29 1240 aa16.41■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Psme1P97371 249 aa16.41■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Maco1Q7TQE6 664 aaKnown RBP16.41■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Supt6hQ62383 1726 aaKnown RBP16.4■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Afap1Q80YS6 731 aa16.4■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Map7O88735 730 aa16.39■□□□□ 0.22
Fam49b-201ENSMUST00000063838 Usp16Q99LG0 825 aa16.39■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Uspl1Q3ULM6 1089 aa16.39■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Zmym4A2A791 1549 aaKnown RBP16.39■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Cabp2Q9JLK4 216 aa16.38■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Mapkbp1Q6NS57 1503 aa16.38■□□□□ 0.21
Fam49b-201ENSMUST00000063838 PalmQ9Z0P4 383 aa16.38■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Ppp2r3aB2RXC8 1150 aa16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Atp10dQ8K2X1 1416 aa16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Arhgef11Q68FM7 1552 aa16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Arhgef12Q8R4H2 1543 aaKnown RBP16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 MpripP97434 1024 aa16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Tfip11Q9ERA6 838 aaKnown RBP16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Trim44Q9QXA7 346 aa16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Nup160Q9Z0W3 1402 aaKnown RBP16.37■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Klhdc4Q921I2 584 aa16.36■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Nek4Q9Z1J2 792 aa16.36■□□□□ 0.21
Fam49b-201ENSMUST00000063838 PtmaP26350 111 aa16.36■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Adamts12Q811B3 1600 aa16.36■□□□□ 0.21
Fam49b-201ENSMUST00000063838 Ylpm1Q9R0I7 1386 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms