RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Dhx9O70133 1380 aaKnown RBP18.08■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Hecw2Q6I6G8 1578 aa18.08■□□□□ 0.49
Prpf38b-201ENSMUST00000029480 Iqgap3F8VQ29 1632 aa18.08■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Uggt1Q6P5E4 1551 aa18.08■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Ylpm1Q9R0I7 1386 aaKnown RBP18.08■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Cd109Q8R422 1442 aa18.08■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 RereQ80TZ9 1558 aa18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Cdc42bpgQ80UW5 1551 aa18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Znf518aB2RRF6 1478 aaKnown RBP18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Synj2Q9D2G5 1434 aa18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Efcab6Q6P1E8 1516 aa18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Rrp7aQ9D1C9 280 aaKnown RBP18.07■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Upf2A2AT37 1269 aaKnown RBP18.06■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Dip2cE9PWR4 1557 aa18.06■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Myom2Q14BI5 1463 aa18.05■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Zmym3Q9JLM4 1370 aa18.05■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Tulp4Q9JIL5 1547 aa18.05■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 AampJ3QN89 436 aa18.05■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Ehbp1l1Q99MS7 1716 aa18.04■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Edc4Q3UJB9 1406 aaKnown RBP18.04■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Plxnc1Q9QZC2 1574 aa18.03■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Zfp644E9QA22 1323 aa18.03■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Map3k5O35099 1380 aa18.03■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Ccdc9Q8VC31 543 aaKnown RBP18.02■□□□□ 0.48
Prpf38b-201ENSMUST00000029480 Rims1Q99NE5 1463 aa18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Ino80Q6ZPV2 1559 aa18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Spag9Q58A65 1321 aaKnown RBP18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Adamts7Q68SA9 1657 aa18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Map4P27546 1125 aaKnown RBP18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Ift172Q6VH22 1749 aa18.01■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Tex14Q7M6U3 1450 aa18■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Anp32aO35381 247 aa18■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Ptch1Q61115 1434 aa17.99■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Eif2ak4Q9QZ05 1648 aa17.99■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Stard8Q8K031 1019 aa17.98■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Adgrb3Q80ZF8 1522 aa17.98■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Cul9Q80TT8 1865 aa17.97■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Calr4Q3TQS0 420 aa17.97■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 TnikP83510 1323 aa17.97■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 KdrP35918 1367 aa17.96■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Mroh1E0CZ22 1640 aa17.96■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Abcc6Q9R1S7 1498 aa17.96■□□□□ 0.47
Prpf38b-201ENSMUST00000029480 Atf7ipQ7TT18 1306 aa17.95■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Cdk5rap2Q8K389 1822 aa17.94■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Gli2Q0VGT2 1544 aa17.93■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Card11Q8CIS0 1159 aa17.93■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Trak1Q6PD31 939 aa17.93■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Kcnn1Q9EQR3 537 aa17.93■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Kdm5aQ3UXZ9 1690 aa17.92■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Kank1E9Q238 1360 aa17.92■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Nolc1E9Q5C9 702 aaKnown RBP17.91■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Rundc1Q0VDN7 615 aa17.91■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Prex1Q69ZK0 1650 aa17.9■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Yeats2Q3TUF7 1407 aa17.9■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Slc4a2P13808 1237 aaKnown RBP17.9■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Rbm10Q99KG3 930 aaKnown RBP17.9■□□□□ 0.46
Prpf38b-201ENSMUST00000029480 Talpid3E9PV87 1520 aa17.89■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Abca6Q8K441 1624 aa17.88■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Pde4cQ3UEI1 686 aa17.88■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 MaddQ80U28 1577 aa17.88■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Gm16486A0A1D5RMD1 1434 aa17.86■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Nphp4P59240 1425 aa17.86■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 NgefQ8CHT1 710 aa17.86■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Hfm1D3Z4R1 1434 aa17.83■□□□□ 0.45
Prpf38b-201ENSMUST00000029480 Kif3bQ61771 747 aa17.83■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Ncbp3Q8BZR9 615 aaKnown RBP17.82■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Gprasp1Q5U4C1 1347 aa17.82■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Anp32bQ9EST5 272 aaKnown RBP17.82■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Qser1A2BIE1 1698 aa17.82■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Myom1Q62234 1667 aaKnown RBP17.82■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Mrs2Q5NCE8 434 aa17.81■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 NpatQ8BMA5 1420 aa17.81■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Exoc6Q8R313 802 aa17.8■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Rtn4Q99P72 1162 aaKnown RBP17.8■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 CltcQ68FD5 1675 aaKnown RBP17.79■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Wwc2Q6NXJ0 1187 aa17.77■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Ube2q2Q8K2Z8 378 aa17.77■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 Mbd3Q9Z2D8 285 aaKnown RBP17.77■□□□□ 0.44
Prpf38b-201ENSMUST00000029480 P3h3Q8CG70 732 aa17.77■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Rgl3Q3UYI5 709 aa17.75■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Adamtsl3G3UXC7 1706 aa17.75■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Skint5A7XUY5 1461 aa17.74■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Adgrl1Q80TR1 1466 aa17.74■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Ppp4r2Q0VGB7 417 aa17.74■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Znf541Q0GGX2 1363 aa17.74■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Med14A2ABV5 1459 aaKnown RBP17.74■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Ttc21bQ0HA38 1315 aa17.73■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Vgll3P85442 326 aa17.72■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Pcdh10E9PXQ7 1057 aa17.71■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Supt16hQ920B9 1047 aa17.71■□□□□ 0.43
Prpf38b-201ENSMUST00000029480 Tshz2Q68FE9 1030 aa17.7■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Zbtb7cQ8VCZ7 619 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 PrxO55103 1391 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Arhgap23Q69ZH9 1483 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 RictorQ6QI06 1708 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Ccdc27Q3V036 639 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Taok2Q6ZQ29 1240 aa17.69■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Zscan21Q07231 555 aa17.68■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Tmf1B9EKI3 1091 aa17.67■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Wdr43Q6ZQL4 677 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms