RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Asxl2Q8BZ32 1370 aa10.22□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 GphnQ8BUV3 769 aaKnown RBP10.21□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Rock2P70336 1388 aa10.21□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Lamc1P02468 1607 aaKnown RBP10.21□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Stra8P70278 393 aa10.21□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Rad21Q61550 635 aaKnown RBP10.21□□□□□ -0.77
Crnkl1-201ENSMUST00000001818 Skint5A7XUY5 1461 aa10.21□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Talpid3E9PV87 1520 aa10.21□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Camsap2Q8C1B1 1461 aa10.2□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 DroshaQ5HZJ0 1373 aaKnown RBP10.2□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Cyb5rlB1AS42 316 aa10.2□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Uggt2E9Q4X2 1504 aa10.2□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 AnkarA2RT91 1465 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Qser1A2BIE1 1698 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 AU022751B1B0V2 589 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 NgefQ8CHT1 710 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Mink1Q9JM52 1308 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Polr3aB2RXC6 1390 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Znf316Q6PGE4 1016 aa10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Exosc9Q9JHI7 438 aaKnown RBP10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Prrc2bQ7TPM1 1486 aaKnown RBP10.19□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Abcc6Q9R1S7 1498 aa10.18□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Kif14L0N7N1 1674 aaKnown RBP10.18□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Dot1lQ6XZL8 1540 aa10.18□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Prex1Q69ZK0 1650 aa10.17□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 HnrnpmQ9D0E1 729 aaKnown RBP10.17□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Abca17E9PX95 1733 aa10.17□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Robo2Q7TPD3 1470 aa10.17□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Topbp1Q6ZQF0 1515 aa10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Myo5cE9Q1F5 1742 aa10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Smg6P61406 1418 aaKnown RBP10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Mug2P28666 1451 aa10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Kiaa0556Q8C753 1610 aa10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Slc4a1apE9PX68 744 aa10.16□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Efcab6Q6P1E8 1516 aa10.15□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Slc52a2Q9D8F3 450 aa10.15□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Cdk13Q69ZA1 1511 aaKnown RBP10.15□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Cul9Q80TT8 1865 aa10.15□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Atp2b2Q9R0K7 1198 aa10.15□□□□□ -0.78
Crnkl1-201ENSMUST00000001818 Ercc6l2Q9JIM3 1537 aa10.15□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 CltcQ68FD5 1675 aaKnown RBP10.14□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Ppip5k1A2ARP1 1436 aa10.14□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Sox12Q04890 314 aa10.14□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Knl1Q66JQ7 1612 aa10.14□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Stard8Q8K031 1019 aa10.13□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Slc4a2P13808 1237 aaKnown RBP10.13□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Znf710Q3U288 666 aa10.13□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Anp32bQ9EST5 272 aaKnown RBP10.13□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Zmym4A2A791 1549 aaKnown RBP10.12□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Pank3Q8R2W9 370 aa10.12□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Myom2Q14BI5 1463 aa10.12□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Zranb1Q7M760 708 aa10.11□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Inpp5dQ9ES52 1191 aa10.11□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Cpsf1Q9EPU4 1441 aaKnown RBP10.11□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Naip7Q9JIB3 1402 aa10.11□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Tnnt3Q9QZ47 272 aa10.1□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 CenpjQ569L8 1344 aa10.1□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Tulp4Q9JIL5 1547 aa10.1□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Calr4Q3TQS0 420 aa10.1□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Adgrb3Q80ZF8 1522 aa10.09□□□□□ -0.79
Crnkl1-201ENSMUST00000001818 Rangap1P46061 589 aaKnown RBP10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Ofd1Q80Z25 1017 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Ahdc1Q6PAL7 1594 aaKnown RBP10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Iqgap3F8VQ29 1632 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Q7TT23 1179 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Tmf1B9EKI3 1091 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 CenpbP27790 599 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Dcaf11Q91VU6 549 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Akap12Q9WTQ5 1684 aa10.08□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Kif21bQ9QXL1 1668 aa10.07□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Slc4a3P16283 1227 aa10.07□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Cdk19Q8BWD8 501 aa10.07□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 4930407I10RikD3Z5T8 1512 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Fam184bQ0KK56 942 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Adamts13Q769J6 1426 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 RalgapbQ8BQZ4 1484 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 IghaA0A0A6YXW6 389 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Evi5lH3BKQ3 813 aa10.06□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Gsto1O09131 240 aa10.05□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Rpgrip1lQ8CG73 1264 aa10.05□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Myo3aQ8K3H5 1613 aa10.05□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Nlrp6Q91WS2 869 aa10.05□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Ncoa1P70365 1447 aa10.04□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Q3UJC8 639 aa10.04□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Apbb1Q9QXJ1 710 aa10.04□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 PtprmP28828 1452 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Trpm1Q2TV84 1622 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Tecpr2Q3UH45 1423 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Adamts7Q68SA9 1657 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Adamtsl3G3UXC7 1706 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Ppp4r2Q0VGB7 417 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Tmem94Q7TSH8 1360 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Neurod2Q62414 383 aa10.03□□□□□ -0.8
Crnkl1-201ENSMUST00000001818 Zscan10Q3URR7 782 aa10.02□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Tmem131lQ3U3D7 1597 aa10.02□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Plekhg5Q66T02 1073 aa10.02□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Mbd5B1AYB6 1498 aa10.02□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Lrrc7Q80TE7 1490 aa10.02□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Gm10563F6WIE4 79 aa10.01□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 PrxO55103 1391 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms