RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAT1	YOR048C	YFH1	Q07540	174 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	MED4	Q12343	284 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	AIM17	P23180	465 aa	Known RBP	4.63	□□□□□ -1.67
RAT1	YOR048C	ERV15	P38312	142 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	YEA4	P40004	342 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	CTK2	P46962	323 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	STD1	Q02794	444 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	YDR114C	Q04597	100 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	DIC1	Q06143	298 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	YPR147C	Q06522	304 aa	Known RBP	4.63	□□□□□ -1.67
RAT1	YOR048C	PML1	Q07930	204 aa	Predicted RBP	4.63	□□□□□ -1.67
RAT1	YOR048C	YOR352W	Q08816	343 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	ERV2	Q12284	196 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	YBR255C-A	Q3E776	120 aa		4.63	□□□□□ -1.67
RAT1	YOR048C	YMR084W	A2P2R3	262 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	RPS16A	P0CX51	143 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	RPS16B	P0CX52	143 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MIR1	P23641	311 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	POP5	P28005	173 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	BAT1	P38891	393 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	RMD6	P39975	231 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	CRH1	P53301	507 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	SAM50	P53969	484 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	YLR460C	P54007	376 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	YMR082C	Q04276	118 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	SWT1	Q12104	458 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	SPS4	P09937	338 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	RPS25B	P0C0T4	108 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	BGL2	P15703	313 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MDH2	P22133	377 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	IMG2	P25642	146 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	ALK2	P32789	676 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	SWD3	P38123	315 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	CUE1	P38428	203 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	XPT1	P47165	209 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	MTM1	P53320	366 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	OCA2	P53949	197 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	HRI1	Q05905	244 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	ARR3	Q06598	404 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	RPS25A	Q3E792	108 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MIG1	P27705	504 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	OCH1	P31755	480 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	MRPL11	P36521	249 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	YBR090C	P38253	122 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	RPA34	P47006	233 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	HSV2	P50079	448 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MSO1	P53604	210 aa	Known RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MRPS17	Q03246	237 aa	Predicted RBP	4.62	□□□□□ -1.67
RAT1	YOR048C	MIX14	Q04341	121 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	YDR344C	Q05510	147 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	YLR456W	Q06199	204 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	YIL046W-A	Q3E7Z4	54 aa		4.62	□□□□□ -1.67
RAT1	YOR048C	MDM35	O60200	86 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	URA5	P13298	226 aa	Known RBP	4.61	□□□□□ -1.67
RAT1	YOR048C	CKA1	P15790	372 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	FUN14	P18411	198 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	AFG1	P32317	509 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	DAD2	P36162	133 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	CYT2	Q00873	224 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	TMA10	Q06177	86 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	AGC1	Q12482	902 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	MSI1	P13712	422 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	YBR197C	P38306	217 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	YER079W	P40052	210 aa	Known RBP	4.61	□□□□□ -1.67
RAT1	YOR048C	CSI2	Q08054	341 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	PRR2	Q12310	699 aa		4.61	□□□□□ -1.67
RAT1	YOR048C	PHD1	P36093	366 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	MRPS9	P38120	278 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YIL086C	P40503	102 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YGL262W	P53054	175 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	ERV14	P53173	138 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YNR066C	P53752	436 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	DCN1	Q12395	269 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YNR034W-A	Q3E841	98 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	SCO1	P23833	295 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	RPB7	P34087	171 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	MRPL4	P36517	319 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YBR096W	P38256	230 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	YPC1	P38298	316 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	MSY1	P48527	492 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	ECM18	Q04623	453 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	NAT3	Q06504	195 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	THI72	Q08579	599 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	FCY22	Q12119	530 aa		4.6	□□□□□ -1.67
RAT1	YOR048C	TOR2	P32600	2474 aa	Known RBP	4.6	□□□□□ -1.67
RAT1	YOR048C	CDC36	P06100	191 aa	Predicted RBP	4.59	□□□□□ -1.67
RAT1	YOR048C	RPL30	P14120	105 aa	Known RBP	4.59	□□□□□ -1.67
RAT1	YOR048C	SEC59	P20048	519 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	YGL010W	P25338	174 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	SOF1	P33750	489 aa	Known RBP	4.59	□□□□□ -1.67
RAT1	YOR048C	WSS1	P38838	269 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	YIL163C	P40448	117 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	IRC24	P40580	263 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	MOB2	P43563	287 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	YNR040W	P53736	256 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	WSC2	P53832	503 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	ATG21	Q02887	496 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	CTR3	Q06686	241 aa		4.59	□□□□□ -1.67
RAT1	YOR048C	LDS2	Q08218	356 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms