RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A TAZ1Q06510 381 aa2.47□□□□□ -2.01
YSF3YNL138W-A GPN3Q06543 272 aa2.47□□□□□ -2.01
YSF3YNL138W-A SAL1D6W196 494 aa2.46□□□□□ -2.02
YSF3YNL138W-A TIM9O74700 87 aa2.46□□□□□ -2.02
YSF3YNL138W-A RPL39P04650 51 aa2.46□□□□□ -2.02
YSF3YNL138W-A CMD1P06787 147 aaKnown RBP2.46□□□□□ -2.02
YSF3YNL138W-A MEK1P24719 497 aaPredicted RBP2.46□□□□□ -2.02
YSF3YNL138W-A YCR090CP25654 182 aaKnown RBP2.46□□□□□ -2.02
YSF3YNL138W-A ACB1P31787 87 aa2.46□□□□□ -2.02
YSF3YNL138W-A DOA4P32571 926 aa2.46□□□□□ -2.02
YSF3YNL138W-A FMT1P32785 401 aa2.46□□□□□ -2.02
YSF3YNL138W-A YKL071WP36086 256 aa2.46□□□□□ -2.02
YSF3YNL138W-A YCR087C-AP37263 153 aa2.46□□□□□ -2.02
YSF3YNL138W-A YHR035WP38769 630 aa2.46□□□□□ -2.02
YSF3YNL138W-A FIP1P45976 327 aa2.46□□□□□ -2.02
YSF3YNL138W-A AIF1P52923 378 aa2.46□□□□□ -2.02
YSF3YNL138W-A HCH1P53834 153 aa2.46□□□□□ -2.02
YSF3YNL138W-A PRM7Q12459 698 aa2.46□□□□□ -2.02
YSF3YNL138W-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
YSF3YNL138W-A CBF1P17106 351 aa2.45□□□□□ -2.02
YSF3YNL138W-A SUA5P32579 426 aa2.45□□□□□ -2.02
YSF3YNL138W-A CUE1P38428 203 aa2.45□□□□□ -2.02
YSF3YNL138W-A YER085CP40058 173 aa2.45□□□□□ -2.02
YSF3YNL138W-A MSS2P40990 351 aa2.45□□□□□ -2.02
YSF3YNL138W-A PFS2P42841 465 aaKnown RBP2.45□□□□□ -2.02
YSF3YNL138W-A PXR1P53335 271 aaPredicted RBP2.45□□□□□ -2.02
YSF3YNL138W-A YNR064CP53750 290 aa2.45□□□□□ -2.02
YSF3YNL138W-A MRPS17Q03246 237 aaPredicted RBP2.45□□□□□ -2.02
YSF3YNL138W-A YMR114CQ04471 368 aaKnown RBP2.45□□□□□ -2.02
YSF3YNL138W-A YLR283WQ05867 314 aa2.45□□□□□ -2.02
YSF3YNL138W-A NIP7Q08962 181 aaKnown RBP2.45□□□□□ -2.02
YSF3YNL138W-A MCP1Q12106 302 aa2.45□□□□□ -2.02
YSF3YNL138W-A USB1Q12208 290 aaKnown RBP2.45□□□□□ -2.02
YSF3YNL138W-A MRX4Q12467 430 aa2.45□□□□□ -2.02
YSF3YNL138W-A YPR096CO13587 100 aa2.44□□□□□ -2.02
YSF3YNL138W-A COS2P0CX12 379 aa2.44□□□□□ -2.02
YSF3YNL138W-A COS3P0CX13 379 aa2.44□□□□□ -2.02
YSF3YNL138W-A FUS3P16892 353 aaKnown RBP2.44□□□□□ -2.02
YSF3YNL138W-A YCR016WP25617 290 aaKnown RBP2.44□□□□□ -2.02
YSF3YNL138W-A CAT2P32796 670 aaKnown RBP2.44□□□□□ -2.02
YSF3YNL138W-A ZRT1P32804 376 aa2.44□□□□□ -2.02
YSF3YNL138W-A COG3P40094 801 aa2.44□□□□□ -2.02
YSF3YNL138W-A COS4P43542 379 aa2.44□□□□□ -2.02
YSF3YNL138W-A OTU1P43558 301 aa2.44□□□□□ -2.02
YSF3YNL138W-A RPA43P46669 326 aa2.44□□□□□ -2.02
YSF3YNL138W-A YGL185CP53100 379 aa2.44□□□□□ -2.02
YSF3YNL138W-A HST4P53688 370 aa2.44□□□□□ -2.02
YSF3YNL138W-A YMR209CQ03648 457 aa2.44□□□□□ -2.02
YSF3YNL138W-A YMR166CQ03829 368 aa2.44□□□□□ -2.02
YSF3YNL138W-A GTO3Q04806 366 aa2.44□□□□□ -2.02
YSF3YNL138W-A MRX8Q05473 314 aa2.44□□□□□ -2.02
YSF3YNL138W-A SSQ1Q05931 657 aaPredicted RBP2.44□□□□□ -2.02
YSF3YNL138W-A PBP4Q07362 185 aaKnown RBP2.44□□□□□ -2.02
YSF3YNL138W-A IRC19Q07843 230 aa2.44□□□□□ -2.02
YSF3YNL138W-A YOL019WQ08157 551 aa2.44□□□□□ -2.02
YSF3YNL138W-A SIA1Q12212 622 aa2.44□□□□□ -2.02
YSF3YNL138W-A FMP16Q12497 93 aa2.44□□□□□ -2.02
YSF3YNL138W-A COX10P21592 462 aa2.43□□□□□ -2.02
YSF3YNL138W-A RPL5P26321 297 aaKnown RBP2.43□□□□□ -2.02
YSF3YNL138W-A MSN4P33749 630 aa2.43□□□□□ -2.02
YSF3YNL138W-A YRB2P40517 327 aa2.43□□□□□ -2.02
YSF3YNL138W-A YAR1P46683 200 aa2.43□□□□□ -2.02
YSF3YNL138W-A MRX5P47007 382 aa2.43□□□□□ -2.02
YSF3YNL138W-A COX16P47081 118 aa2.43□□□□□ -2.02
YSF3YNL138W-A YPL080CQ02826 108 aa2.43□□□□□ -2.02
YSF3YNL138W-A YDR102CQ03864 110 aa2.43□□□□□ -2.02
YSF3YNL138W-A YMR244WQ04018 355 aa2.43□□□□□ -2.02
YSF3YNL138W-A BTS1Q12051 335 aa2.43□□□□□ -2.02
YSF3YNL138W-A YHR214C-EQ8TGK0 99 aa2.43□□□□□ -2.02
YSF3YNL138W-A ASF2P32448 525 aaPredicted RBP2.42□□□□□ -2.02
YSF3YNL138W-A ARO4P32449 370 aaKnown RBP2.42□□□□□ -2.02
YSF3YNL138W-A SEC17P32602 292 aa2.42□□□□□ -2.02
YSF3YNL138W-A SWD2P36104 329 aaPredicted RBP2.42□□□□□ -2.02
YSF3YNL138W-A AIM29P36154 155 aa2.42□□□□□ -2.02
YSF3YNL138W-A FRM2P37261 193 aa2.42□□□□□ -2.02
YSF3YNL138W-A KRE29P40026 464 aa2.42□□□□□ -2.02
YSF3YNL138W-A HIT1P46973 164 aa2.42□□□□□ -2.02
YSF3YNL138W-A GEP7P53171 287 aa2.42□□□□□ -2.02
YSF3YNL138W-A COS6P53344 381 aa2.42□□□□□ -2.02
YSF3YNL138W-A MRPL50P53724 139 aa2.42□□□□□ -2.02
YSF3YNL138W-A ASI3P53983 676 aa2.42□□□□□ -2.02
YSF3YNL138W-A KRE28Q04431 385 aa2.42□□□□□ -2.02
YSF3YNL138W-A SEC10Q06245 871 aa2.42□□□□□ -2.02
YSF3YNL138W-A YPR195CQ06594 109 aa2.42□□□□□ -2.02
YSF3YNL138W-A YET3Q07451 203 aa2.42□□□□□ -2.02
YSF3YNL138W-A KTI12P34253 313 aaKnown RBP2.41□□□□□ -2.02
YSF3YNL138W-A YKL162CP36052 402 aa2.41□□□□□ -2.02
YSF3YNL138W-A ETR1P38071 380 aa2.41□□□□□ -2.02
YSF3YNL138W-A BDH1P39714 382 aa2.41□□□□□ -2.02
YSF3YNL138W-A NSA1P53136 463 aaPredicted RBP2.41□□□□□ -2.02
YSF3YNL138W-A BNA7Q04066 261 aa2.41□□□□□ -2.02
YSF3YNL138W-A UTP15Q04305 513 aaKnown RBP2.41□□□□□ -2.02
YSF3YNL138W-A APC9Q12107 265 aa2.41□□□□□ -2.02
YSF3YNL138W-A YOR343CQ12484 108 aa2.41□□□□□ -2.02
YSF3YNL138W-A COX2P00410 251 aa2.4□□□□□ -2.03
YSF3YNL138W-A ERD2P18414 219 aa2.4□□□□□ -2.03
YSF3YNL138W-A RPL24BP24000 155 aaKnown RBP2.4□□□□□ -2.03
YSF3YNL138W-A ZRT3P34240 503 aa2.4□□□□□ -2.03
YSF3YNL138W-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
YSF3YNL138W-A YHB1P39676 399 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms