RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W HIS3P06633 220 aa3.66□□□□□ -1.82
VPS36YLR417W YOL163WP0CF20 169 aa3.66□□□□□ -1.82
VPS36YLR417W YMR31P19955 123 aa3.66□□□□□ -1.82
VPS36YLR417W GDH2P33327 1092 aaKnown RBP3.66□□□□□ -1.82
VPS36YLR417W RIB1P38066 345 aa3.66□□□□□ -1.82
VPS36YLR417W SPL2P38839 148 aa3.66□□□□□ -1.82
VPS36YLR417W HAM1P47119 197 aaKnown RBP3.66□□□□□ -1.82
VPS36YLR417W ARO8P53090 500 aaKnown RBP3.66□□□□□ -1.82
VPS36YLR417W YOR342CQ12182 319 aa3.66□□□□□ -1.82
VPS36YLR417W CLG1P35190 452 aa3.65□□□□□ -1.82
VPS36YLR417W KDX1P36005 433 aa3.65□□□□□ -1.82
VPS36YLR417W MAL32P38158 584 aa3.65□□□□□ -1.82
VPS36YLR417W URA8P38627 578 aaPredicted RBP3.65□□□□□ -1.82
VPS36YLR417W RTC3P38804 111 aaPredicted RBP3.65□□□□□ -1.82
VPS36YLR417W YER034WP40022 185 aaKnown RBP3.65□□□□□ -1.82
VPS36YLR417W YIR035CP40579 254 aa3.65□□□□□ -1.82
VPS36YLR417W NOP19P53317 196 aaPredicted RBP3.65□□□□□ -1.82
VPS36YLR417W MAL12P53341 584 aa3.65□□□□□ -1.82
VPS36YLR417W YDR124WQ04608 324 aa3.65□□□□□ -1.82
VPS36YLR417W YDR222WQ04925 415 aa3.65□□□□□ -1.82
VPS36YLR417W DYN3Q04949 312 aa3.65□□□□□ -1.82
VPS36YLR417W COA4Q05809 96 aa3.65□□□□□ -1.82
VPS36YLR417W SEI1Q06058 285 aa3.65□□□□□ -1.82
VPS36YLR417W RRP40Q08285 240 aaKnown RBP3.65□□□□□ -1.82
VPS36YLR417W SYC1Q08553 188 aaPredicted RBP3.65□□□□□ -1.82
VPS36YLR417W SMT3Q12306 101 aaKnown RBP3.65□□□□□ -1.82
VPS36YLR417W PRR2Q12310 699 aa3.65□□□□□ -1.82
VPS36YLR417W YBL112CQ3E7Y4 105 aa3.65□□□□□ -1.82
VPS36YLR417W YEL009C-AA0A023PZF2 135 aa3.64□□□□□ -1.83
VPS36YLR417W BCY1P07278 416 aaKnown RBP3.64□□□□□ -1.83
VPS36YLR417W YBR121C-AP0C5L4 52 aa3.64□□□□□ -1.83
VPS36YLR417W CYC2P38909 366 aa3.64□□□□□ -1.83
VPS36YLR417W PEP8P40335 379 aa3.64□□□□□ -1.83
VPS36YLR417W OST3P48439 350 aa3.64□□□□□ -1.83
VPS36YLR417W NIF3P53081 288 aa3.64□□□□□ -1.83
VPS36YLR417W TIM8P57744 87 aa3.64□□□□□ -1.83
VPS36YLR417W YLR126CQ12288 251 aa3.64□□□□□ -1.83
VPS36YLR417W YBL008W-AQ3E821 79 aa3.64□□□□□ -1.83
VPS36YLR417W ISD11Q6Q560 94 aa3.64□□□□□ -1.83
VPS36YLR417W STE18P18852 110 aa3.64□□□□□ -1.83
VPS36YLR417W DBF2P22204 572 aa3.64□□□□□ -1.83
VPS36YLR417W TEM1P38987 245 aa3.64□□□□□ -1.83
VPS36YLR417W GAA1P39012 614 aa3.64□□□□□ -1.83
VPS36YLR417W FAR7P43592 221 aa3.64□□□□□ -1.83
VPS36YLR417W APS3P47064 194 aa3.64□□□□□ -1.83
VPS36YLR417W CUS2P53830 285 aaPredicted RBP3.64□□□□□ -1.83
VPS36YLR417W FYV6P53913 173 aa3.64□□□□□ -1.83
VPS36YLR417W GOT1Q03554 138 aa3.64□□□□□ -1.83
VPS36YLR417W YOR186WQ08560 144 aa3.64□□□□□ -1.83
VPS36YLR417W MGM101P32787 269 aaKnown RBP3.63□□□□□ -1.83
VPS36YLR417W NTF2P33331 125 aaKnown RBP3.63□□□□□ -1.83
VPS36YLR417W PRP18P33411 251 aaPredicted RBP3.63□□□□□ -1.83
VPS36YLR417W UTP30P36144 274 aaKnown RBP3.63□□□□□ -1.83
VPS36YLR417W VMA7P39111 118 aa3.63□□□□□ -1.83
VPS36YLR417W ERG28P40030 148 aa3.63□□□□□ -1.83
VPS36YLR417W HPM1P40481 377 aa3.63□□□□□ -1.83
VPS36YLR417W LSM1P47017 172 aaKnown RBP3.63□□□□□ -1.83
VPS36YLR417W MIC26P50087 233 aa3.63□□□□□ -1.83
VPS36YLR417W FEX1Q08913 375 aa3.63□□□□□ -1.83
VPS36YLR417W YKL183C-AQ3E765 70 aa3.63□□□□□ -1.83
VPS36YLR417W IPP1P00817 287 aaKnown RBP3.62□□□□□ -1.83
VPS36YLR417W ASF2P32448 525 aaPredicted RBP3.62□□□□□ -1.83
VPS36YLR417W YJL028WP47062 111 aa3.62□□□□□ -1.83
VPS36YLR417W MRPS17Q03246 237 aaPredicted RBP3.62□□□□□ -1.83
VPS36YLR417W CDC123Q05791 360 aa3.62□□□□□ -1.83
VPS36YLR417W YPR063CQ12160 140 aa3.62□□□□□ -1.83
VPS36YLR417W YOR214CQ12282 236 aa3.62□□□□□ -1.83
VPS36YLR417W YIL177CP40434 1758 aa3.62□□□□□ -1.83
VPS36YLR417W YJL225CP40889 1758 aa3.62□□□□□ -1.83
VPS36YLR417W SPT3P06844 337 aa3.61□□□□□ -1.83
VPS36YLR417W ZWF1P11412 505 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W GCY1P14065 312 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
VPS36YLR417W CBT1P36038 271 aaPredicted RBP3.61□□□□□ -1.83
VPS36YLR417W SSH1P38353 490 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W EGD2P38879 174 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W MCM22P47167 239 aa3.61□□□□□ -1.83
VPS36YLR417W YGL034CP53186 121 aa3.61□□□□□ -1.83
VPS36YLR417W DID2P69771 204 aa3.61□□□□□ -1.83
VPS36YLR417W YOL019WQ08157 551 aa3.61□□□□□ -1.83
VPS36YLR417W FEX2Q08991 375 aa3.61□□□□□ -1.83
VPS36YLR417W TIM22Q12328 207 aa3.61□□□□□ -1.83
VPS36YLR417W FAS2P19097 1887 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W CPR5P35176 225 aa3.61□□□□□ -1.83
VPS36YLR417W YMR144WP40214 342 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W ECO1P43605 281 aa3.61□□□□□ -1.83
VPS36YLR417W ALG9P53868 555 aaKnown RBP3.61□□□□□ -1.83
VPS36YLR417W COG5P53951 403 aa3.61□□□□□ -1.83
VPS36YLR417W SLM2P53955 656 aa3.61□□□□□ -1.83
VPS36YLR417W EMI1Q04406 187 aa3.61□□□□□ -1.83
VPS36YLR417W YDR278CQ05612 105 aa3.61□□□□□ -1.83
VPS36YLR417W NEJ1Q06148 342 aa3.61□□□□□ -1.83
VPS36YLR417W YNG1Q08465 219 aa3.61□□□□□ -1.83
VPS36YLR417W SFC1P33303 322 aa3.6□□□□□ -1.83
VPS36YLR417W TAF14P35189 244 aa3.6□□□□□ -1.83
VPS36YLR417W SKG1P36169 355 aa3.6□□□□□ -1.83
VPS36YLR417W ECM13P38195 257 aa3.6□□□□□ -1.83
VPS36YLR417W TRM9P49957 279 aa3.6□□□□□ -1.83
VPS36YLR417W NSA1P53136 463 aaPredicted RBP3.6□□□□□ -1.83
VPS36YLR417W YNL046WP53956 172 aa3.6□□□□□ -1.83
VPS36YLR417W YNL033WP53964 284 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms