RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YHR214C-EQ8TGK0 99 aa2.98□□□□□ -1.93
SDS3YIL084C RPL39P04650 51 aa2.97□□□□□ -1.93
SDS3YIL084C UGA1P17649 471 aa2.97□□□□□ -1.93
SDS3YIL084C SAR1P20606 190 aaKnown RBP2.97□□□□□ -1.93
SDS3YIL084C BIG1P38813 335 aa2.97□□□□□ -1.93
SDS3YIL084C RGI1P40043 161 aaPredicted RBP2.97□□□□□ -1.93
SDS3YIL084C LOH1P47055 219 aa2.97□□□□□ -1.93
SDS3YIL084C KRE28Q04431 385 aa2.97□□□□□ -1.93
SDS3YIL084C PAA1Q12447 191 aaKnown RBP2.97□□□□□ -1.93
SDS3YIL084C RPS23AP0CX29 145 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C RPS23BP0CX30 145 aa2.96□□□□□ -1.94
SDS3YIL084C FUS3P16892 353 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C ARC19P33204 171 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C YKL162CP36052 402 aa2.96□□□□□ -1.94
SDS3YIL084C MRPL17P36528 281 aa2.96□□□□□ -1.94
SDS3YIL084C RCK1P38622 512 aa2.96□□□□□ -1.94
SDS3YIL084C MNN9P39107 395 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C RIB4P50861 169 aaPredicted RBP2.96□□□□□ -1.94
SDS3YIL084C SDS23P53172 527 aa2.96□□□□□ -1.94
SDS3YIL084C FMP48P53233 369 aa2.96□□□□□ -1.94
SDS3YIL084C OKP1P53298 406 aa2.96□□□□□ -1.94
SDS3YIL084C RCF2P53721 224 aa2.96□□□□□ -1.94
SDS3YIL084C CUS2P53830 285 aaPredicted RBP2.96□□□□□ -1.94
SDS3YIL084C YPR147CQ06522 304 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C NIP7Q08962 181 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C GRE1Q08969 168 aa2.96□□□□□ -1.94
SDS3YIL084C YOR214CQ12282 236 aa2.96□□□□□ -1.94
SDS3YIL084C UTP23Q12339 254 aaKnown RBP2.96□□□□□ -1.94
SDS3YIL084C YGR035W-AQ45U48 73 aa2.96□□□□□ -1.94
SDS3YIL084C YPK2P18961 677 aa2.95□□□□□ -1.94
SDS3YIL084C CCA1P21269 546 aa2.95□□□□□ -1.94
SDS3YIL084C MRPL20P22354 195 aaPredicted RBP2.95□□□□□ -1.94
SDS3YIL084C GPX1P36014 167 aa2.95□□□□□ -1.94
SDS3YIL084C FLX1P40464 311 aa2.95□□□□□ -1.94
SDS3YIL084C YIR035CP40579 254 aa2.95□□□□□ -1.94
SDS3YIL084C YNR062CP53748 327 aa2.95□□□□□ -1.94
SDS3YIL084C TAZ1Q06510 381 aa2.95□□□□□ -1.94
SDS3YIL084C HRT1Q08273 121 aa2.95□□□□□ -1.94
SDS3YIL084C USB1Q12208 290 aaKnown RBP2.95□□□□□ -1.94
SDS3YIL084C DCP1Q12517 231 aaPredicted RBP2.95□□□□□ -1.94
SDS3YIL084C SAS5Q99314 248 aa2.95□□□□□ -1.94
SDS3YIL084C TIM9O74700 87 aa2.94□□□□□ -1.94
SDS3YIL084C RPL5P26321 297 aaKnown RBP2.94□□□□□ -1.94
SDS3YIL084C INO2P26798 304 aa2.94□□□□□ -1.94
SDS3YIL084C TIM12P32830 109 aa2.94□□□□□ -1.94
SDS3YIL084C YBR063CP38083 404 aa2.94□□□□□ -1.94
SDS3YIL084C RRG9P40156 214 aa2.94□□□□□ -1.94
SDS3YIL084C COX16P47081 118 aa2.94□□□□□ -1.94
SDS3YIL084C YMR244WQ04018 355 aa2.94□□□□□ -1.94
SDS3YIL084C GMC1Q04399 608 aa2.94□□□□□ -1.94
SDS3YIL084C RRG8Q06109 277 aa2.94□□□□□ -1.94
SDS3YIL084C SPO77Q06134 477 aa2.94□□□□□ -1.94
SDS3YIL084C PBP4Q07362 185 aaKnown RBP2.94□□□□□ -1.94
SDS3YIL084C RAD7P06779 565 aa2.93□□□□□ -1.94
SDS3YIL084C DBP3P20447 523 aaKnown RBP2.93□□□□□ -1.94
SDS3YIL084C MIG1P27705 504 aa2.93□□□□□ -1.94
SDS3YIL084C PPA2P28239 310 aa2.93□□□□□ -1.94
SDS3YIL084C FMT1P32785 401 aa2.93□□□□□ -1.94
SDS3YIL084C ZRT3P34240 503 aa2.93□□□□□ -1.94
SDS3YIL084C FRM2P37261 193 aa2.93□□□□□ -1.94
SDS3YIL084C SOP4P39543 234 aaPredicted RBP2.93□□□□□ -1.94
SDS3YIL084C CDC40P40968 455 aaPredicted RBP2.93□□□□□ -1.94
SDS3YIL084C HST4P53688 370 aa2.93□□□□□ -1.94
SDS3YIL084C YNR064CP53750 290 aa2.93□□□□□ -1.94
SDS3YIL084C VPS71Q03433 280 aa2.93□□□□□ -1.94
SDS3YIL084C YDR114CQ04597 100 aa2.93□□□□□ -1.94
SDS3YIL084C COQ10Q08058 207 aa2.93□□□□□ -1.94
SDS3YIL084C MIM1Q08176 113 aa2.93□□□□□ -1.94
SDS3YIL084C VIK1Q12045 647 aa2.93□□□□□ -1.94
SDS3YIL084C SIA1Q12212 622 aa2.93□□□□□ -1.94
SDS3YIL084C COX10P21592 462 aa2.92□□□□□ -1.94
SDS3YIL084C RPS1BP23248 255 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C RPL16BP26785 198 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C RPC19P28000 142 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C CAM1P29547 415 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C VPH2P32341 215 aa2.92□□□□□ -1.94
SDS3YIL084C JEN1P36035 616 aa2.92□□□□□ -1.94
SDS3YIL084C PET8P38921 284 aa2.92□□□□□ -1.94
SDS3YIL084C BDH1P39714 382 aa2.92□□□□□ -1.94
SDS3YIL084C SLM1P40485 686 aa2.92□□□□□ -1.94
SDS3YIL084C GCN20P43535 752 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C MAL13P53338 473 aa2.92□□□□□ -1.94
SDS3YIL084C YNR066CP53752 436 aa2.92□□□□□ -1.94
SDS3YIL084C YNL046WP53956 172 aa2.92□□□□□ -1.94
SDS3YIL084C PRP11Q07350 266 aaPredicted RBP2.92□□□□□ -1.94
SDS3YIL084C TRM10Q12400 293 aa2.92□□□□□ -1.94
SDS3YIL084C DFM1Q12743 341 aaKnown RBP2.92□□□□□ -1.94
SDS3YIL084C PET9P18239 318 aaKnown RBP2.91□□□□□ -1.94
SDS3YIL084C IFM1P25038 676 aa2.91□□□□□ -1.94
SDS3YIL084C GDH2P33327 1092 aaKnown RBP2.91□□□□□ -1.94
SDS3YIL084C MCH2P36032 473 aa2.91□□□□□ -1.94
SDS3YIL084C SWD2P36104 329 aaPredicted RBP2.91□□□□□ -1.94
SDS3YIL084C YBR032WP38223 100 aa2.91□□□□□ -1.94
SDS3YIL084C MTW1P39731 289 aa2.91□□□□□ -1.94
SDS3YIL084C LOC1P43586 204 aaPredicted RBP2.91□□□□□ -1.94
SDS3YIL084C YGL118CP53132 145 aa2.91□□□□□ -1.94
SDS3YIL084C NSA1P53136 463 aaPredicted RBP2.91□□□□□ -1.94
SDS3YIL084C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SDS3YIL084C TFC7Q12415 435 aa2.91□□□□□ -1.94
SDS3YIL084C MRX4Q12467 430 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms