RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	IRC18	P47056	224 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	APS3	P47064	194 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	MOG1	P47123	218 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	BRR6	P53062	197 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	ALG13	P53178	202 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	CDH1	P53197	566 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	TAZ1	Q06510	381 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	STE7	P06784	515 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	PET54	P10834	293 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	MRPL20	P22354	195 aa	Predicted RBP	4.56	□□□□□ -1.68
YEF1	YEL041W	IFM1	P25038	676 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	QRI5	P32344	111 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	UPS2	P35200	230 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	ETR1	P38071	380 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	SSH1	P38353	490 aa	Known RBP	4.56	□□□□□ -1.68
YEF1	YEL041W	PET8	P38921	284 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	SEN34	P39707	275 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	COG3	P40094	801 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	COS4	P43542	379 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	BOL2	P53082	120 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	YNR066C	P53752	436 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	BOR1	P53838	576 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	NRK1	P53915	240 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	TRM12	Q04235	462 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	YLR177W	Q06251	628 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	YOL019W	Q08157	551 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	SME1	Q12330	94 aa	Predicted RBP	4.56	□□□□□ -1.68
YEF1	YEL041W	YMR230W-A	Q3E7B5	62 aa		4.56	□□□□□ -1.68
YEF1	YEL041W	HFA1	P32874	2273 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	TCA17	P32613	152 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	CLG1	P35190	452 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	YCR087C-A	P37263	153 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	YBR241C	P38142	488 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YEF1	YEL041W	EFM1	P38732	585 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	TPC1	P53257	314 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	COS6	P53344	381 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	RCF2	P53721	224 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	NHP10	Q03435	203 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	SCS7	Q03529	384 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	YET2	Q04210	160 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	GMC1	Q04399	608 aa		4.55	□□□□□ -1.68
YEF1	YEL041W	YPL245W	Q12179	454 aa	Known RBP	4.55	□□□□□ -1.68
YEF1	YEL041W	TPI1	P00942	248 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	NHP6A	P11632	93 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YEF1	YEL041W	NTF2	P33331	125 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	SDS24	P38314	527 aa		4.54	□□□□□ -1.68
YEF1	YEL041W	YHR127W	P38833	243 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	SMX2	P40204	77 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	JAC1	P53193	184 aa		4.54	□□□□□ -1.68
YEF1	YEL041W	SFH1	Q06168	426 aa		4.54	□□□□□ -1.68
YEF1	YEL041W	YLR030W	Q07967	263 aa		4.54	□□□□□ -1.68
YEF1	YEL041W	RRS1	Q08746	203 aa	Known RBP	4.54	□□□□□ -1.68
YEF1	YEL041W	SEC14	P24280	304 aa	Known RBP	4.53	□□□□□ -1.68
YEF1	YEL041W	CAM1	P29547	415 aa	Known RBP	4.53	□□□□□ -1.68
YEF1	YEL041W	SOL2	P37262	315 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	BDH1	P39714	382 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	MIC19	P43594	170 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	YGR015C	P53208	328 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	FYV6	P53913	173 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	YLR152C	P54072	576 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	GOT1	Q03554	138 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	HPT1	Q04178	221 aa	Known RBP	4.53	□□□□□ -1.68
YEF1	YEL041W	PEX30	Q06169	523 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	NOC4	Q06512	552 aa	Predicted RBP	4.53	□□□□□ -1.68
YEF1	YEL041W	YLR031W	Q07978	186 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	RFU1	Q08003	200 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	YLR050C	Q12155	161 aa	Known RBP	4.53	□□□□□ -1.68
YEF1	YEL041W	BBP1	Q12365	385 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	YMR030W-A	Q3E760	96 aa		4.53	□□□□□ -1.68
YEF1	YEL041W	STT4	P37297	1900 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	BCY1	P07278	416 aa	Known RBP	4.52	□□□□□ -1.69
YEF1	YEL041W	CDC50	P25656	391 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	PTM1	P32857	523 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	SFC1	P33303	322 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	JEN1	P36035	616 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	MIG3	P39943	394 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	MDM34	P53083	459 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	DPP1	Q05521	289 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	PST1	Q12355	444 aa		4.52	□□□□□ -1.69
YEF1	YEL041W	NUM1	Q00402	2748 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	SPT3	P06844	337 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	SHE1	P38200	338 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	YER137C	P40083	148 aa	Known RBP	4.51	□□□□□ -1.69
YEF1	YEL041W	PEP8	P40335	379 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	SNM1	P40993	198 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	YGR201C	P42936	225 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	RNH201	P53942	307 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	COG5	P53951	403 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	RSM10	Q03201	203 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	VHS1	Q03785	461 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	YPL278C	Q08990	100 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	TPO4	Q12256	659 aa		4.51	□□□□□ -1.69
YEF1	YEL041W	RPL21B	Q12672	160 aa	Known RBP	4.51	□□□□□ -1.69
YEF1	YEL041W	IDP1	P21954	428 aa	Known RBP	4.5	□□□□□ -1.69
YEF1	YEL041W	YCR090C	P25654	182 aa	Known RBP	4.5	□□□□□ -1.69
YEF1	YEL041W	UBC8	P28263	218 aa		4.5	□□□□□ -1.69
YEF1	YEL041W	SPS18	P32572	300 aa		4.5	□□□□□ -1.69
YEF1	YEL041W	GOS1	P38736	223 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms