RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SLM1P40485 686 aa2.8□□□□□ -1.96
CDC40YDR364C YIL029CP40538 142 aa2.8□□□□□ -1.96
CDC40YDR364C YIA6P40556 373 aa2.8□□□□□ -1.96
CDC40YDR364C GDS1P41913 522 aa2.8□□□□□ -1.96
CDC40YDR364C YCH1P42937 148 aa2.8□□□□□ -1.96
CDC40YDR364C SER2P42941 309 aa2.8□□□□□ -1.96
CDC40YDR364C PAM16P42949 149 aa2.8□□□□□ -1.96
CDC40YDR364C HIT1P46973 164 aa2.8□□□□□ -1.96
CDC40YDR364C BRR6P53062 197 aa2.8□□□□□ -1.96
CDC40YDR364C SAY1P53324 424 aa2.8□□□□□ -1.96
CDC40YDR364C NUP116Q02630 1113 aa2.8□□□□□ -1.96
CDC40YDR364C TDA1Q03533 586 aa2.8□□□□□ -1.96
CDC40YDR364C YDR249CQ03787 373 aa2.8□□□□□ -1.96
CDC40YDR364C MIX14Q04341 121 aa2.8□□□□□ -1.96
CDC40YDR364C PEX10Q05568 337 aa2.8□□□□□ -1.96
CDC40YDR364C RRG7Q08774 242 aaPredicted RBP2.8□□□□□ -1.96
CDC40YDR364C YRA1Q12159 226 aaKnown RBP2.8□□□□□ -1.96
CDC40YDR364C YLR099W-AQ3E798 87 aa2.8□□□□□ -1.96
CDC40YDR364C POL2P21951 2222 aaKnown RBP2.8□□□□□ -1.96
CDC40YDR364C PIS1P06197 220 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C ADK1P07170 222 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C YFL068WP0CX99 160 aa2.79□□□□□ -1.96
CDC40YDR364C YLL066W-AP0CY00 160 aa2.79□□□□□ -1.96
CDC40YDR364C YLL067W-AP0CY01 160 aa2.79□□□□□ -1.96
CDC40YDR364C MATALPHA1P0CY06 175 aa2.79□□□□□ -1.96
CDC40YDR364C HMLALPHA1P0CY07 175 aa2.79□□□□□ -1.96
CDC40YDR364C FUS3P16892 353 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C NAM9P27929 486 aa2.79□□□□□ -1.96
CDC40YDR364C EHD3P28817 500 aa2.79□□□□□ -1.96
CDC40YDR364C HOM6P31116 359 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C FUN26P31381 517 aa2.79□□□□□ -1.96
CDC40YDR364C AGA1P32323 725 aa2.79□□□□□ -1.96
CDC40YDR364C PAU2P32612 120 aa2.79□□□□□ -1.96
CDC40YDR364C TMA19P35691 167 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C YKL063CP35725 167 aa2.79□□□□□ -1.96
CDC40YDR364C SRP102P36057 244 aaPredicted RBP2.79□□□□□ -1.96
CDC40YDR364C PMU1P36069 295 aa2.79□□□□□ -1.96
CDC40YDR364C YER184CP39961 794 aa2.79□□□□□ -1.96
CDC40YDR364C WWM1P43582 211 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C YAR1P46683 200 aa2.79□□□□□ -1.96
CDC40YDR364C NCA3P46955 337 aa2.79□□□□□ -1.96
CDC40YDR364C LCB3P47013 409 aa2.79□□□□□ -1.96
CDC40YDR364C PGU1P47180 361 aa2.79□□□□□ -1.96
CDC40YDR364C CPD1P53314 239 aa2.79□□□□□ -1.96
CDC40YDR364C RSM10Q03201 203 aa2.79□□□□□ -1.96
CDC40YDR364C CGI121Q03705 181 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C SNX41Q04053 625 aa2.79□□□□□ -1.96
CDC40YDR364C BNA7Q04066 261 aa2.79□□□□□ -1.96
CDC40YDR364C YMR252CQ04814 134 aa2.79□□□□□ -1.96
CDC40YDR364C MRX8Q05473 314 aa2.79□□□□□ -1.96
CDC40YDR364C SDO1Q07953 250 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C HNT3Q08702 217 aa2.79□□□□□ -1.96
CDC40YDR364C RDL2Q08742 149 aaKnown RBP2.79□□□□□ -1.96
CDC40YDR364C TIR4Q12218 487 aaPredicted RBP2.79□□□□□ -1.96
CDC40YDR364C EAF3Q12432 401 aa2.79□□□□□ -1.96
CDC40YDR364C YOR343CQ12484 108 aa2.79□□□□□ -1.96
CDC40YDR364C HFA1P32874 2273 aa2.79□□□□□ -1.96
CDC40YDR364C QCR7P00128 127 aa2.78□□□□□ -1.96
CDC40YDR364C TDH2P00358 332 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C MSW1P04803 379 aa2.78□□□□□ -1.96
CDC40YDR364C YFR010W-AP0C5N0 62 aa2.78□□□□□ -1.96
CDC40YDR364C RPS18AP0CX55 146 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C RPS18BP0CX56 146 aaPredicted RBP2.78□□□□□ -1.96
CDC40YDR364C YHR214C-DP0CX93 97 aa2.78□□□□□ -1.96
CDC40YDR364C CPR1P14832 162 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C STE18P18852 110 aa2.78□□□□□ -1.96
CDC40YDR364C DBF2P22204 572 aa2.78□□□□□ -1.96
CDC40YDR364C SCO1P23833 295 aa2.78□□□□□ -1.96
CDC40YDR364C LDB16P25587 256 aa2.78□□□□□ -1.96
CDC40YDR364C YCR102CP25608 368 aa2.78□□□□□ -1.96
CDC40YDR364C CPR3P25719 182 aa2.78□□□□□ -1.96
CDC40YDR364C RPL16AP26784 199 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C RPL16BP26785 198 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C SPT14P32363 452 aa2.78□□□□□ -1.96
CDC40YDR364C PRS4P38063 326 aaPredicted RBP2.78□□□□□ -1.96
CDC40YDR364C OM14P38325 134 aa2.78□□□□□ -1.96
CDC40YDR364C REE1P40893 198 aa2.78□□□□□ -1.96
CDC40YDR364C YFL067WP43537 175 aa2.78□□□□□ -1.96
CDC40YDR364C ECO1P43605 281 aa2.78□□□□□ -1.96
CDC40YDR364C RPE1P46969 238 aa2.78□□□□□ -1.96
CDC40YDR364C DOC1P53068 250 aa2.78□□□□□ -1.96
CDC40YDR364C MRH4P53166 561 aa2.78□□□□□ -1.96
CDC40YDR364C YPL039WQ03080 316 aa2.78□□□□□ -1.96
CDC40YDR364C SDC1Q03323 175 aa2.78□□□□□ -1.96
CDC40YDR364C YDR209CQ03480 137 aa2.78□□□□□ -1.96
CDC40YDR364C YPR147CQ06522 304 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C SYC1Q08553 188 aaPredicted RBP2.78□□□□□ -1.96
CDC40YDR364C MDM32Q12171 622 aa2.78□□□□□ -1.96
CDC40YDR364C HMS1Q12398 434 aa2.78□□□□□ -1.96
CDC40YDR364C YOR032W-AQ8TGS1 66 aa2.78□□□□□ -1.96
CDC40YDR364C GCN1P33892 2672 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C PRP8P33334 2413 aaKnown RBP2.78□□□□□ -1.96
CDC40YDR364C YAL064W-BO13512 126 aa2.77□□□□□ -1.97
CDC40YDR364C COX9P07255 59 aa2.77□□□□□ -1.97
CDC40YDR364C RPL31AP0C2H8 113 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C NHP6BP11633 99 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C CTA1P15202 515 aa2.77□□□□□ -1.97
CDC40YDR364C BUD23P25627 275 aaPredicted RBP2.77□□□□□ -1.97
CDC40YDR364C IES6P32617 166 aa2.77□□□□□ -1.97
CDC40YDR364C ANR2P36090 516 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms