RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	PGD1	P40356	397 aa		2.53	□□□□□ -2
NSE3	YDR288W	AYR1	P40471	297 aa		2.53	□□□□□ -2
NSE3	YDR288W	BMT5	P40493	336 aa		2.53	□□□□□ -2
NSE3	YDR288W	RPL33B	P41056	107 aa	Known RBP	2.53	□□□□□ -2
NSE3	YDR288W	CWC21	Q03375	135 aa	Known RBP	2.53	□□□□□ -2
NSE3	YDR288W	GAS3	Q03655	524 aa		2.53	□□□□□ -2
NSE3	YDR288W	TRM12	Q04235	462 aa		2.53	□□□□□ -2
NSE3	YDR288W	YDR157W	A0A023PZE8	133 aa		2.52	□□□□□ -2.01
NSE3	YDR288W	YLR156W	P0CE96	114 aa		2.52	□□□□□ -2.01
NSE3	YDR288W	YLR159W	P0CE97	114 aa		2.52	□□□□□ -2.01
NSE3	YDR288W	YLR161W	P0CE98	114 aa		2.52	□□□□□ -2.01
NSE3	YDR288W	LSM4	P40070	187 aa	Known RBP	2.52	□□□□□ -2.01
NSE3	YDR288W	YFR054C	P43622	192 aa		2.52	□□□□□ -2.01
NSE3	YDR288W	BAT2	P47176	376 aa	Known RBP	2.52	□□□□□ -2.01
NSE3	YDR288W	CWC23	P52868	283 aa	Predicted RBP	2.52	□□□□□ -2.01
NSE3	YDR288W	REP2	P03872	296 aa		2.51	□□□□□ -2.01
NSE3	YDR288W	CDC36	P06100	191 aa	Predicted RBP	2.51	□□□□□ -2.01
NSE3	YDR288W	PET9	P18239	318 aa	Known RBP	2.51	□□□□□ -2.01
NSE3	YDR288W	PRX1	P34227	261 aa	Known RBP	2.51	□□□□□ -2.01
NSE3	YDR288W	DSE2	P38844	325 aa		2.51	□□□□□ -2.01
NSE3	YDR288W	AST2	P39945	430 aa	Known RBP	2.51	□□□□□ -2.01
NSE3	YDR288W	PDR17	P53844	350 aa		2.51	□□□□□ -2.01
NSE3	YDR288W	YRA1	Q12159	226 aa	Known RBP	2.51	□□□□□ -2.01
NSE3	YDR288W	MDH2	P22133	377 aa		2.5	□□□□□ -2.01
NSE3	YDR288W	YKT6	P36015	200 aa	Known RBP	2.5	□□□□□ -2.01
NSE3	YDR288W	YNR062C	P53748	327 aa		2.5	□□□□□ -2.01
NSE3	YDR288W	MEI4	P29467	408 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	TRM5	P38793	499 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	ICE2	P40499	491 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	AGE2	P40529	298 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	TIR3	P40552	269 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	CGR1	P53188	120 aa		2.49	□□□□□ -2.01
NSE3	YDR288W	SPG3	Q04398	127 aa	Predicted RBP	2.49	□□□□□ -2.01
NSE3	YDR288W	YMR226C	Q05016	267 aa	Known RBP	2.49	□□□□□ -2.01
NSE3	YDR288W	MDM32	Q12171	622 aa		2.48	□□□□□ -2.01
NSE3	YDR288W	TSC3	Q3E790	80 aa		2.48	□□□□□ -2.01
NSE3	YDR288W	DDI2	P0CH63	225 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	DDI3	P0CH64	225 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	SPS18	P32572	300 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	TCA17	P32613	152 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	PTM1	P32857	523 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	IKI1	P38874	309 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	SWP1	Q02795	286 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	YHR214C-E	Q8TGK0	99 aa		2.47	□□□□□ -2.01
NSE3	YDR288W	HTB1	P02293	131 aa	Known RBP	2.46	□□□□□ -2.02
NSE3	YDR288W	HTB2	P02294	131 aa		2.46	□□□□□ -2.02
NSE3	YDR288W	RPL25	P04456	142 aa	Known RBP	2.46	□□□□□ -2.02
NSE3	YDR288W	SVP26	P38869	228 aa		2.46	□□□□□ -2.02
NSE3	YDR288W	YPL162C	Q12042	273 aa		2.46	□□□□□ -2.02
NSE3	YDR288W	TUS1	Q06412	1307 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	TIM9	O74700	87 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	CDC7	P06243	507 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	KSS1	P14681	368 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	CBF1	P17106	351 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	TAF14	P35189	244 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	YET1	P35723	206 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	YCR087C-A	P37263	153 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	SIP3	P38717	1229 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	YNL217W	P40152	326 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	RFC4	P40339	323 aa	Known RBP	2.45	□□□□□ -2.02
NSE3	YDR288W	BUD25	P85052	153 aa		2.45	□□□□□ -2.02
NSE3	YDR288W	RPL27B	P0C2H7	136 aa	Known RBP	2.44	□□□□□ -2.02
NSE3	YDR288W	MER1	P16523	270 aa		2.44	□□□□□ -2.02
NSE3	YDR288W	SNC2	P33328	115 aa		2.44	□□□□□ -2.02
NSE3	YDR288W	UTP30	P36144	274 aa	Known RBP	2.44	□□□□□ -2.02
NSE3	YDR288W	MRPL17	P36528	281 aa		2.44	□□□□□ -2.02
NSE3	YDR288W	SML1	Q04964	104 aa		2.44	□□□□□ -2.02
NSE3	YDR288W	MATALPHA2	P0CY08	210 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	HMLALPHA2	P0CY09	210 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	BET1	P22804	142 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	RFA3	P26755	122 aa	Known RBP	2.43	□□□□□ -2.02
NSE3	YDR288W	UMP1	P38293	148 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	EAF6	P47128	113 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	YGR050C	P53231	118 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	CUS2	P53830	285 aa	Predicted RBP	2.43	□□□□□ -2.02
NSE3	YDR288W	LSM7	P53905	115 aa	Known RBP	2.43	□□□□□ -2.02
NSE3	YDR288W	MRPS17	Q03246	237 aa	Predicted RBP	2.43	□□□□□ -2.02
NSE3	YDR288W	MCP1	Q12106	302 aa		2.43	□□□□□ -2.02
NSE3	YDR288W	SEC4	P07560	215 aa	Known RBP	2.42	□□□□□ -2.02
NSE3	YDR288W	URA5	P13298	226 aa	Known RBP	2.42	□□□□□ -2.02
NSE3	YDR288W	SEC17	P32602	292 aa		2.42	□□□□□ -2.02
NSE3	YDR288W	YRB2	P40517	327 aa		2.42	□□□□□ -2.02
NSE3	YDR288W	BOL2	P53082	120 aa		2.42	□□□□□ -2.02
NSE3	YDR288W	MET5	P47169	1442 aa		2.42	□□□□□ -2.02
NSE3	YDR288W	FZF1	P32805	299 aa		2.41	□□□□□ -2.02
NSE3	YDR288W	GVP36	P40531	326 aa	Known RBP	2.41	□□□□□ -2.02
NSE3	YDR288W	DOC1	P53068	250 aa		2.41	□□□□□ -2.02
NSE3	YDR288W	PET191	Q02772	108 aa		2.41	□□□□□ -2.02
NSE3	YDR288W	ADF1	Q2V2Q1	113 aa		2.41	□□□□□ -2.02
NSE3	YDR288W	MAG1	P22134	296 aa	Known RBP	2.4	□□□□□ -2.03
NSE3	YDR288W	YBR219C	P38317	127 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	AVT2	P39981	480 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	YNR077C	P53758	84 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	YOL160W	Q08321	113 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	GET4	Q12125	312 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	YFR032C-B	Q8TGU2	87 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	FLO9	P39712	1322 aa		2.4	□□□□□ -2.03
NSE3	YDR288W	CKS1	P20486	150 aa	Known RBP	2.39	□□□□□ -2.03
NSE3	YDR288W	HMF1	P40037	129 aa	Known RBP	2.39	□□□□□ -2.03
NSE3	YDR288W	AIM25	P47140	327 aa		2.39	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms