RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 HSP90AA4PQ58FG1 418 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CDKAL1Q5VV42 579 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 EEF1DP3Q658K8 133 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SLFN12LQ6IEE8 588 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SLC9A9Q8IVB4 645 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 FAM114A1Q8IWE2 563 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SIX5Q8N196 739 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 GPR161Q8N6U8 529 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM174Q8WUU8 243 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SECISBP2LQ93073 1101 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SAAL1Q96ER3 474 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ZBTB45Q96K62 511 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CNOT6LQ96LI5 555 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CEP63Q96MT8 703 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 MSTO1Q9BUK6 570 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 CDT1Q9H211 546 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 HSD3B7Q9H2F3 369 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 PCIF1Q9H4Z3 704 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 AGO3Q9H9G7 860 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ERVK-5Q9HDB9 667 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SAMSN1Q9NSI8 373 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 AGPAT5Q9NUQ2 364 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 DMAC2Q9NW81 257 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 MAGEC2Q9UBF1 373 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 PADI3Q9ULW8 664 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 ST3GAL5Q9UNP4 418 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 PIN4Q9Y237 131 aaKnown RBP10.21□□□□□ -0.77
PHGDH-228ENST00000641847 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 STYXL1Q9Y6J8 313 aa10.21□□□□□ -0.77
PHGDH-228ENST00000641847 SPTBN2O15020 2390 aa10.21□□□□□ -0.78
PHGDH-228ENST00000641847 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 GOLGA8IPA6NC78 632 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 GOLGA8JA6NMD2 632 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 KCNJ18B7U540 433 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 GPR182O15218 404 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 CLDN3O15551 220 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 PI15O43692 258 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 EXOC3O60645 756 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 AKAP3O75969 853 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 ATP1A3P13637 1013 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 ZNF18P17022 549 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 AXLP30530 894 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 HOXA11P31270 313 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 CA8P35219 290 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 MCL1Q07820 350 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 MYBPC2Q14324 1141 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 KCNJ12Q14500 433 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 SMC1AQ14683 1233 aaKnown RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 GSE1Q14687 1217 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 CWF19L1Q69YN2 538 aaKnown RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 NOTUMQ6P988 496 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 OTOP3Q7RTS5 596 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 RTN4RL1Q86UN2 441 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 CDR2LQ86X02 465 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 XXYLT1Q8NBI6 393 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 COLGALT1Q8NBJ5 622 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 CCDC51Q96ER9 411 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 BORCS6Q96GS4 357 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 TCHPQ9BT92 498 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 HAPLN2Q9GZV7 340 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 SMOC2Q9H3U7 446 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 PTPRHQ9HD43 1115 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 C1orf112Q9NSG2 853 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 DZANK1Q9NVP4 752 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 AGO2Q9UKV8 859 aaKnown RBP10.2□□□□□ -0.78
PHGDH-228ENST00000641847 FRMD4BQ9Y2L6 1034 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 R4GN57 208 aa10.2□□□□□ -0.78
PHGDH-228ENST00000641847 A0A0B4J269 797 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 A0A1B0GUA9 196 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 KIAA0391O15091 583 aaKnown RBP10.19□□□□□ -0.78
PHGDH-228ENST00000641847 HOXA2O43364 376 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 EXTL3O43909 919 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 NPTXRO95502 500 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 GNA14O95837 355 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 EOMESO95936 686 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 MCF2P10911 925 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 EPB41P11171 864 aaKnown RBP10.19□□□□□ -0.78
PHGDH-228ENST00000641847 EEF1GP26641 437 aaKnown RBP10.19□□□□□ -0.78
PHGDH-228ENST00000641847 CASP4P49662 377 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 SPAG1Q07617 926 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 CCDC40Q4G0X9 1142 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 ZBTB41Q5SVQ8 909 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 SLC27A1Q6PCB7 646 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 APBB1IPQ7Z5R6 666 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-228ENST00000641847 FILIP1Q7Z7B0 1213 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 IRF2BP1Q8IU81 584 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 CBWD2Q8IUF1 395 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 CREBRFQ8IUR6 639 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 FAM186BQ8IYM0 893 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 ABI1Q8IZP0 508 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 GPD1LQ8N335 351 aa10.19□□□□□ -0.78
PHGDH-228ENST00000641847 ZSWIM2Q8NEG5 633 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms