RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 PMM2O15305 246 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 LPXNO60711 386 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 C4BPAP04003 597 aaKnown RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 ODC1P11926 461 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 LRPAP1P30533 357 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 CLCNKBP51801 687 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 GUCY2FP51841 1108 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 MFAP3P55082 362 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 LRMPQ12912 555 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 SYCP1Q15431 976 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 C9orf50Q5SZB4 431 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 C9orf57Q5W0N0 161 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 TMCO2Q7Z6W1 182 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 TTC39CQ8N584 583 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 GDF15Q99988 308 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 GOLGA2P5Q9HBQ8 144 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.183e-8■■■■■ 240.4
PHGDH-220ENST00000641570 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 DSEQ9UL01 958 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
PHGDH-220ENST00000641570 SF3B1O75533 1304 aaKnown RBP eCLIP13.91□□□□□ -0.188e-6■■■■■ 107
PHGDH-220ENST00000641570 A0A1W2PQC6 194 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 LRRC10BA6NIK2 292 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 NRDCO43847 1150 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 BMP8BP34820 402 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 CTNNB1P35222 781 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 BCAR1P56945 870 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 MYL6P60660 151 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 WDR72Q3MJ13 1102 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 ENOSF1Q7L5Y1 443 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 SAMD11Q96NU1 681 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-220ENST00000641570 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 PCDHA11Q9Y5I1 949 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 SNX9Q9Y5X1 595 aa13.91□□□□□ -0.18
PHGDH-220ENST00000641570 PTPRJQ12913 1337 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ADCY5O95622 1261 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF75DP51815 510 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 WNT7BP56706 349 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 UPP1Q16831 310 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 SPECC1LQ69YQ0 1117 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 COLGALT2Q8IYK4 626 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF689Q96CS4 500 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-220ENST00000641570 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 MRFAP1L1Q96HT8 127 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 MIOSQ9NXC5 875 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 APEX2Q9UBZ4 518 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
PHGDH-220ENST00000641570 MRPL42Q9Y6G3 142 aaKnown RBP13.9□□□□□ -0.18
PHGDH-220ENST00000641570 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 NRP1O14786 923 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 KIF4AO95239 1232 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 PTMAP06454 111 aaKnown RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 KRT5P13647 590 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 USP8P40818 1118 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 SLC11A1P49279 550 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 RABGGTBP53611 331 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 HTRA4P83105 476 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 DSC1Q08554 894 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 NR1I3Q14994 352 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 C1orf220Q5T0J3 134 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 TRIM65Q6PJ69 517 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 THEM5Q8N1Q8 247 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 COLGALT1Q8NBJ5 622 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 NAP1L5Q96NT1 182 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 PI4K2AQ9BTU6 479 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms