RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 IQCDQ96DY2 449 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 HPDLQ96IR7 371 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PPP1R10Q96QC0 940 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 INTS2Q9H0H0 1204 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 RNF19AQ9NV58 838 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 CXXC1Q9P0U4 656 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 INPPL1O15357 1258 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 HUS1O60921 280 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 COL9A1P20849 921 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 RFX1P22670 979 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 TBXAS1P24557 533 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CA8P35219 290 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 GATMP50440 423 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CLDN10P78369 228 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 KRT17Q04695 432 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 ELAVL2Q12926 359 aaKnown RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 TRIM14Q14142 442 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 SHHQ15465 462 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CBWD6Q4V339 395 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CBWD3Q5JTY5 395 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CBWD5Q5RIA9 395 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 FMNL3Q8IVF7 1028 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 MAFAQ8NHW3 353 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
PHGDH-218ENST00000641491 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■□□□□ 10.9
PHGDH-218ENST00000641491 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
PHGDH-218ENST00000641491 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 PMM2O15305 246 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 LPXNO60711 386 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 C4BPAP04003 597 aaKnown RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 ODC1P11926 461 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 LRPAP1P30533 357 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 CLCNKBP51801 687 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 GUCY2FP51841 1108 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 MFAP3P55082 362 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 LRMPQ12912 555 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 SYCP1Q15431 976 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 C9orf50Q5SZB4 431 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 C9orf57Q5W0N0 161 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 TMCO2Q7Z6W1 182 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 TTC39CQ8N584 583 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 GOLGA2P5Q9HBQ8 144 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.183e-8■■■■■ 240.4
PHGDH-218ENST00000641491 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
PHGDH-218ENST00000641491 DSEQ9UL01 958 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
PHGDH-218ENST00000641491 SF3B1O75533 1304 aaKnown RBP eCLIP13.91□□□□□ -0.188e-6■■■■■ 107
PHGDH-218ENST00000641491 A0A1W2PQC6 194 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 LRRC10BA6NIK2 292 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 NRDCO43847 1150 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 CTNNB1P35222 781 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 BCAR1P56945 870 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 MYL6P60660 151 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 WDR72Q3MJ13 1102 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 ENOSF1Q7L5Y1 443 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 SAMD11Q96NU1 681 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-218ENST00000641491 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 PCDHA11Q9Y5I1 949 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 SNX9Q9Y5X1 595 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 LAMA2P24043 3122 aaKnown RBP13.91□□□□□ -0.18
PHGDH-218ENST00000641491 PRUNE2Q8WUY3 3088 aa13.91□□□□□ -0.18
PHGDH-218ENST00000641491 PTPRJQ12913 1337 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ADCY5O95622 1261 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF75DP51815 510 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 WNT7BP56706 349 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 UPP1Q16831 310 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms