RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 PCDHB7Q9Y5E2 793 aa21.33■■□□□ 1
PHGDH-210ENST00000641115 PFKMP08237 780 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 CSF2RAP15509 400 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 TBXAS1P24557 533 aaPredicted RBP21.32■■□□□ 1
PHGDH-210ENST00000641115 SCNN1GP51170 649 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 JAM2P57087 298 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 ARHGAP44Q17R89 818 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 SFMBT2Q5VUG0 894 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 RPUSD2Q8IZ73 545 aaKnown RBP21.32■■□□□ 1
PHGDH-210ENST00000641115 CXorf38Q8TB03 319 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 TATDN2Q93075 761 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 ELMO3Q96BJ8 720 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 BAG1Q99933 345 aaPredicted RBP21.32■■□□□ 1
PHGDH-210ENST00000641115 HTATIP2Q9BUP3 242 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 XYLT2Q9H1B5 865 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 PLAGL2Q9UPG8 496 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 INPP5FQ9Y2H2 1132 aa21.32■■□□□ 1
PHGDH-210ENST00000641115 F8VZ95 297 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 MYO1EQ12965 1108 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 GRIK3Q13003 919 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 DRAP1Q14919 205 aaPredicted RBP21.31■■□□□ 1
PHGDH-210ENST00000641115 ZNF667Q5HYK9 610 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 SYN2Q92777 582 aaPredicted RBP21.31■■□□□ 1
PHGDH-210ENST00000641115 ABHD8Q96I13 439 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 ZNF830Q96NB3 372 aaPredicted RBP21.31■■□□□ 1
PHGDH-210ENST00000641115 APOBEC3GQ9HC16 384 aaKnown RBP21.31■■□□□ 1
PHGDH-210ENST00000641115 TTC3P53804 2025 aa21.31■■□□□ 1
PHGDH-210ENST00000641115 INPPL1O15357 1258 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 OFD1O75665 1012 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 STAT1P42224 750 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 C9orf57Q5W0N0 161 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 SCARA3Q6AZY7 606 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 C7orf61Q8IZ16 206 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 ABI1Q8IZP0 508 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 LRRC52Q8N7C0 313 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 URGCPQ8TCY9 931 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 HPDLQ96IR7 371 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 ZNF560Q96MR9 790 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 NIF3L1Q9GZT8 377 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 KCNF1Q9H3M0 494 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 NUB1Q9Y5A7 615 aa21.3■■□□□ 1
PHGDH-210ENST00000641115 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 HOXA2O43364 376 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 STAU1O95793 577 aaKnown RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 POMCP01189 267 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 P4HA1P13674 534 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 LRPAP1P30533 357 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 HNRNPH3P31942 346 aaKnown RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 PNPLA4P41247 253 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 AFF1P51825 1210 aaKnown RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 SOX4Q06945 474 aaPredicted RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 CUL2Q13617 745 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 COL13A1Q5TAT6 717 aaPredicted RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 TMEM130Q8N3G9 435 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 KAT5Q92993 513 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 JAKMIP2Q96AA8 810 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 FAXDC2Q96IV6 333 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 VRTNQ9H8Y1 702 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 GOLGA2P5Q9HBQ8 144 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 MIOSQ9NXC5 875 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.29■■□□□ 12e-6■■■■■ 31.1
PHGDH-210ENST00000641115 ABHD14A-ACY1A0A1B0GW23 586 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 ANO9A1A5B4 782 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 FGFR1P11362 822 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 SKILP12757 684 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 SOX5P35711 763 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 CCZ1BP86790 482 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 CCZ1P86791 482 aaPredicted RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 ASIC2Q16515 512 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 MEA1Q16626 185 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 WDR72Q3MJ13 1102 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 CLLU1OSQ5K130 101 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 NPAS4Q8IUM7 802 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 KREMEN1Q96MU8 473 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 AIPL1Q9NZN9 384 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 KANSL3Q9P2N6 904 aa21.29■■□□□ 1
PHGDH-210ENST00000641115 NXF1Q9UBU9 619 aaKnown RBP21.29■■□□□ 1
PHGDH-210ENST00000641115 SCN1AP35498 2009 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 EFCAB14O75071 495 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 CCDC172P0C7W6 258 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 FECHP22830 423 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 TNNC1P63316 161 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 PPIGQ13427 754 aaKnown RBP eCLIP21.28■■□□□ 11e-6■□□□□ 10
PHGDH-210ENST00000641115 NAB2Q15742 525 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 NOMO2Q5JPE7 1267 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 CYP26C1Q6V0L0 522 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 SHC3Q92529 594 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 VWCEQ96DN2 955 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 ARID3AQ99856 593 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 GPR88Q9GZN0 384 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 IL23AQ9NPF7 189 aa21.28■■□□□ 1
PHGDH-210ENST00000641115 PIRO00625 290 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 EVI5O60447 810 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 FERP16591 822 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 USP8P40818 1118 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 ARID5AQ03989 594 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 TUSC3Q13454 348 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 E4F1Q66K89 784 aaPredicted RBP21.27■■□□□ 1
PHGDH-210ENST00000641115 TMTC1Q8IUR5 882 aa21.27■■□□□ 1
PHGDH-210ENST00000641115 TMEM139Q8IV31 216 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms