RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 DNAJC25Q9H1X3 360 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 CGNQ9P2M7 1197 aaKnown RBP11.84□□□□□ -0.51
SCARB2-222ENST00000640634 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
SCARB2-222ENST00000640634 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 SPTLC1O15269 473 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 IL18RAPO95256 599 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 ALDH2P05091 517 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 LRRC63Q05C16 580 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TYRO3Q06418 890 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 PSMD6Q15008 389 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 NFIL3Q16649 462 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 MLKLQ8NB16 471 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 POF1BQ8WVV4 589 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 BORCS6Q96GS4 357 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TSG101Q99816 390 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TMEM175Q9BSA9 504 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 ASB7Q9H672 318 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TMEM265A0A087WTH1 108 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 KIAA0391O15091 583 aaKnown RBP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 LRRN2O75325 713 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 B3GAT3O94766 335 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 EFEMP2O95967 443 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 ITGB3P05106 788 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 CSGALNACT2Q8N6G5 542 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TMEM174Q8WUU8 243 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.83□□□□□ -0.52
SCARB2-222ENST00000640634 AAASQ9NRG9 546 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 DPP3Q9NY33 737 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 RWDD2AQ9UIY3 292 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 ADAM28Q9UKQ2 775 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
SCARB2-222ENST00000640634 PRRC2BQ5JSZ5 2229 aaKnown RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 SCN1AP35498 2009 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 HIDE1A8MVS5 230 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 C2CD2LO14523 706 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 CETN3O15182 167 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 TNNI1P19237 187 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 IGFBP4P22692 258 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 ERCC5P28715 1186 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 POLR2BP30876 1174 aaKnown RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 PSEN1P49768 467 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 PPP3CAQ08209 521 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 FUT10Q6P4F1 479 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 SASS6Q6UVJ0 657 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 ADGRD2Q7Z7M1 963 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 IRF2BP1Q8IU81 584 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 MICALL1Q8N3F8 863 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 CGRRF1Q99675 332 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 PLVAPQ9BX97 442 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 KLHL42Q9P2K6 505 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-222ENST00000640634 FRMD4BQ9Y2L6 1034 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 RWDD3Q9Y3V2 267 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 VWA8A3KMH1 1905 aa11.82□□□□□ -0.52
SCARB2-222ENST00000640634 GRXCR2A6NFK2 248 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TADA2AO75478 443 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RECKO95980 971 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RB1P06400 928 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TMEM191BP0C7N4 346 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RPL13P26373 211 aaKnown RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 LRPAP1P30533 357 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 PPM1AP35813 382 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 GCLMP48507 274 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 VAMP7P51809 220 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 CDR1P51861 262 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 PLCB3Q01970 1234 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 BFSP1Q12934 665 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 STX1AQ16623 288 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TIGD5Q53EQ6 642 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms