RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZACNQ401N2 412 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TDRD10Q5VZ19 366 aaKnown RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 SEC14L1Q92503 715 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 FNBP1Q96RU3 617 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TCHPQ9BT92 498 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 CNTNAP2Q9UHC6 1331 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA6L10A0A0M3HER8 536 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TTI1O43156 1089 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ATMINO43313 823 aaPredicted RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TOM1L1O75674 476 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 VTNP04004 478 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ZNF865P0CJ78 1059 aaPredicted RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 HSPA9P38646 679 aaKnown RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ZNF211Q13398 564 aaPredicted RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TFDP1Q14186 410 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 DGKDQ16760 1214 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 NAA35Q5VZE5 725 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 MTHFD1LQ6UB35 978 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 PIK3R5Q8WYR1 880 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ZSWIM1Q9BR11 485 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 C2orf40Q9H1Z8 148 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 C4BPAP04003 597 aaKnown RBP16.14■□□□□ 0.17
TRIM3-215ENST00000639856 KRT5P13647 590 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 COMTP21964 271 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 HNRNPH2P55795 449 aaKnown RBP16.14■□□□□ 0.17
TRIM3-215ENST00000639856 GRIK4Q16099 956 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 MARCH8Q5T0T0 291 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 SCARA3Q6AZY7 606 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 ACAD10Q6JQN1 1059 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 ZNF564Q8TBZ8 553 aaPredicted RBP16.14■□□□□ 0.17
TRIM3-215ENST00000639856 KRT35Q92764 455 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 ZNF653Q96CK0 615 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 WNT8AQ9H1J5 351 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 FZD8Q9H461 694 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 UVRAGQ9P2Y5 699 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 CHORDC1Q9UHD1 332 aaPredicted RBP16.14■□□□□ 0.17
TRIM3-215ENST00000639856 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 AKT3Q9Y243 479 aa16.14■□□□□ 0.17
TRIM3-215ENST00000639856 COL1A2P08123 1366 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 A0A087WZ62 844 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 TMEM110-MUSTN1A8MSY1 372 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
TRIM3-215ENST00000639856 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 LDHAP00338 332 aaKnown RBP16.13■□□□□ 0.17
TRIM3-215ENST00000639856 INHBEP58166 350 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 WDR44Q5JSH3 913 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 EEF1DP3Q658K8 133 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 CD302Q8IX05 232 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 OR5B17Q8NGF7 314 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 CD101Q93033 1021 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 ARL8AQ96BM9 186 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
TRIM3-215ENST00000639856 CELF4Q9BZC1 486 aaKnown RBP16.13■□□□□ 0.17
TRIM3-215ENST00000639856 UTP11Q9Y3A2 253 aaKnown RBP16.13■□□□□ 0.17
TRIM3-215ENST00000639856 MGAMO43451 1857 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 ACKR2O00590 384 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 MAGEB2O15479 319 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 VNN1O95497 513 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 HLA-DRAP01903 254 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 KRT14P02533 472 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 MARCKSL1P49006 195 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 PEX5P50542 639 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 BIRC3Q13489 604 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 CLEC16AQ2KHT3 1053 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 TTMPQ5BVD1 217 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 ERVK-5Q9HDB9 667 aa16.13■□□□□ 0.17
TRIM3-215ENST00000639856 ASAP2O43150 1006 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 DAPK3O43293 454 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 HSPA6P17066 643 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 PROZP22891 400 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 RGS2P41220 211 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 PIK3CAP42336 1068 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 MCL1Q07820 350 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 SREBF2Q12772 1141 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 SPOPLQ6IQ16 392 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 PAXIP1Q6ZW49 1069 aaPredicted RBP16.12■□□□□ 0.17
TRIM3-215ENST00000639856 ADAT2Q7Z6V5 191 aaKnown RBP16.12■□□□□ 0.17
TRIM3-215ENST00000639856 CEP120Q8N960 986 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 LRRC45Q96CN5 670 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 CGRRF1Q99675 332 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 APBA2Q99767 749 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 RAB17Q9H0T7 212 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 NEUROG2Q9H2A3 272 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 GPBP1L1Q9HC44 474 aaPredicted RBP16.12■□□□□ 0.17
TRIM3-215ENST00000639856 PTPRHQ9HD43 1115 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 FAM114A2Q9NRY5 505 aa16.12■□□□□ 0.17
TRIM3-215ENST00000639856 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms