RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 TRIM28Q13263 835 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 LAMB3Q13751 1172 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 SYDE1Q6ZW31 735 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 RTKN2Q8IZC4 609 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 ARHGEF1Q92888 912 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CYFIP2Q96F07 1278 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 PPP1R36Q96LQ0 422 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 KLHL25Q9H0H3 589 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CASS4Q9NQ75 786 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 FAM217BQ9NTX9 383 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 FBXW4P57775 412 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 KIF2BQ8N4N8 673 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CD248Q9HCU0 757 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 SYBUQ9NX95 663 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 SLC9A1P19634 815 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CDH6P55285 790 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 RBBP7Q16576 425 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 TMA16Q96EY4 203 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 EXOSC4Q9NPD3 245 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 PDP2Q9P2J9 529 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 ANGPT2O15123 496 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 KCNA2P16389 499 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 ADORA2BP29275 332 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 RPS6P62753 249 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 KRT33BQ14525 404 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 HEATR4Q86WZ0 1026 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 ZNF512BQ96KM6 892 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 MRPL4Q9BYD3 311 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 PSD3Q9NYI0 1048 aa18.09■□□□□ 0.49
HNRNPU-217ENST00000638952 CDH2P19022 906 aaPredicted RBP18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 MMGT1Q8N4V1 131 aa18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 BBS2Q9BXC9 721 aa18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 LRFN2Q9ULH4 789 aa18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 ASAP2O43150 1006 aa18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 RASSF9O75901 435 aa18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 EIF3EP60228 445 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-217ENST00000638952 ABHD8Q96I13 439 aa18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 MTMR4Q9NYA4 1195 aa18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 HSPA1AP0DMV8 641 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 HSPA1BP0DMV9 641 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 FASTKD1Q53R41 847 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 TRPM8Q7Z2W7 1104 aa18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 USP38Q8NB14 1042 aa18.08■□□□□ 0.48
HNRNPU-217ENST00000638952 APOL1O14791 398 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ATP6V1B1P15313 513 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 NME3Q13232 169 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 JAMLQ86YT9 394 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 NUP93Q8N1F7 819 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ATXN7L3BQ96GX2 97 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 THTPAQ9BU02 230 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 UBAP1Q9NZ09 502 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ZHX2Q9Y6X8 837 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 FLT1P17948 1338 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 TYK2P29597 1187 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 IRAK1P51617 712 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ERVK-24P63145 666 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 SBK1Q52WX2 424 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ASZ1Q8WWH4 475 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 KCNK16Q96T55 309 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ENO3P13929 434 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 TAP1Q03518 808 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ZNF543Q08ER8 600 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ANGPT1Q15389 498 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ERP27Q96DN0 273 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 OTUB1Q96FW1 271 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RANBP17Q9H2T7 1088 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 MAGEA13PA6NCF6 341 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ZNF263O14978 683 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 MYL3P08590 195 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 SEC24CP53992 1094 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 MXD4Q14582 209 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RCOR2Q8IZ40 523 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.481e-8■■■□□ 18.1
HNRNPU-217ENST00000638952 TMEM117Q9H0C3 514 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 EML4Q9HC35 981 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RSPH10B2B2RC85 870 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 HUS1O60921 280 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RSPH10BP0C881 870 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 IREB2P48200 963 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ATXN3P54252 364 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 CRYMQ14894 314 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ELOA2Q8IYF1 753 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 MICU2Q8IYU8 434 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 C4orf33Q8N1A6 199 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 BEST2Q8NFU1 509 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 ZNF507Q8TCN5 953 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 FAM118BQ9BPY3 351 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 TSSK1BQ9BXA7 367 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 GOLPH3Q9H4A6 298 aa18.07■□□□□ 0.48
HNRNPU-217ENST00000638952 STRNO43815 780 aa18.06■□□□□ 0.48
HNRNPU-217ENST00000638952 ITIH2P19823 946 aa18.06■□□□□ 0.48
HNRNPU-217ENST00000638952 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms