RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	SLC32A1	Q9H598	525 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	INVS	Q9Y283	1065 aa		12.96	□□□□□ -0.33
PAX6-238	ENST00000638755	DPYSL4	O14531	572 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	TBX3	O15119	743 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	TRAPPC3	O43617	180 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	DKC1	O60832	514 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	ATG13	O75143	517 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	RECQL4	O94761	1208 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	P4HB	P07237	508 aa	Known RBP	12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	CLCNKB	P51801	687 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	IRX4	P78413	519 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	TWF1	Q12792	350 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	CREB3L3	Q68CJ9	461 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	OTUD6A	Q7L8S5	288 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	HAUS6	Q7Z4H7	955 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	CHCHD4	Q8N4Q1	142 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	SHKBP1	Q8TBC3	707 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	ETNPPL	Q8TBG4	499 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	ADAM32	Q8TC27	787 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	TMEM209	Q96SK2	561 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	GPR88	Q9GZN0	384 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	XPNPEP1	Q9NQW7	623 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	PCNX2	A6NKB5	2137 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	NUP205	Q92621	2012 aa		12.95	□□□□□ -0.34
PAX6-238	ENST00000638755	ABCA7	Q8IZY2	2146 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755		A0A1W2PRU2	124 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	CAPNS1	P04632	268 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	POU5F1B	Q06416	359 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	TMEM132A	Q24JP5	1023 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	GLRA4	Q5JXX5	417 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	STXBP5	Q5T5C0	1151 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	CD300LG	Q6UXG3	332 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	NOSTRIN	Q8IVI9	506 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	CAMKK1	Q8N5S9	505 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	LEMD2	Q8NC56	503 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	C3orf58	Q8NDZ4	430 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	LRIG1	Q96JA1	1093 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	LRRC3B	Q96PB8	259 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	LXN	Q9BS40	222 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	GOLGA2P5	Q9HBQ8	144 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	ASXL3	Q9C0F0	2248 aa		12.94	□□□□□ -0.34
PAX6-238	ENST00000638755	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	TMEM189-UBE2V1	I3L0A0	370 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	MEFV	O15553	781 aa	Predicted RBP	12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	MAPK8	P45983	427 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	SCAP	Q12770	1279 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	KARS	Q15046	597 aa	Known RBP	12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	ARHGAP29	Q52LW3	1261 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	CYP2U1	Q7Z449	544 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	C4orf19	Q8IY42	314 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	CCDC148	Q8NFR7	591 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	RGL1	Q9NZL6	768 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	VPS54	Q9P1Q0	977 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	GDA	Q9Y2T3	454 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	CELSR3	Q9NYQ7	3312 aa		12.93	□□□□□ -0.34
PAX6-238	ENST00000638755	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	TTLL13P	A6NNM8	815 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	CYSRT1	A8MQ03	144 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	PRPF3	O43395	683 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	RNF40	O75150	1001 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	GLRA2	P23416	452 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	CYP3A7	P24462	503 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	RDX	P35241	583 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	EPHA5	P54756	1037 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	AKAP17A	Q02040	695 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	CYP4A11	Q02928	519 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	ACACA	Q13085	2346 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	PPP2R5C	Q13362	524 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	CTTN	Q14247	550 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	UPP1	Q16831	310 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	ITPRIPL2	Q3MIP1	535 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	FSTL4	Q6MZW2	842 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	GLIS3	Q8NEA6	775 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	LSG1	Q9H089	658 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	DDX25	Q9UHL0	483 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	FBXL5	Q9UKA1	691 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	VAV3	Q9UKW4	847 aa		12.92	□□□□□ -0.34
PAX6-238	ENST00000638755	THADA	Q6YHU6	1953 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	ARID2	Q68CP9	1835 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	CCDC196	A0A1B0GTZ2	297 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	LRRIQ4	A6NIV6	560 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755		H0Y626	953 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755		H7C4K7	107 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	SLC37A4	O43826	429 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	TRIM16	O95361	564 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	EGF	P01133	1207 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	ARL2	P36404	184 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	DHPS	P49366	369 aa	Predicted RBP	12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	DGKE	P52429	567 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	NLRP5	P59047	1200 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	EXOSC10	Q01780	885 aa	Known RBP	12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	CACNB1	Q02641	598 aa	Predicted RBP	12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	CTXN3	Q4LDR2	81 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	TMEM196	Q5HYL7	178 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	TPGS2	Q68CL5	300 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	PMS2CL	Q68D20	193 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms