RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 RNF43Q68DV7 783 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 SRRM1Q8IYB3 904 aaKnown RBP21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 ANKRD35Q8N283 1001 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 TAAR1Q96RJ0 339 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 HEMGNQ9BXL5 484 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 KLHL14Q9P2G3 628 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 IGF2BP3O00425 579 aaKnown RBP eCLIP21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 CETPP11597 493 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 GBP2P32456 591 aaPredicted RBP21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 MTFR1Q15390 333 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 ACCSLQ4AC99 568 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 ILDR2Q71H61 639 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 PWWP2AQ96N64 755 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 OSBPL8Q9BZF1 889 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 ARHGEF3Q9NR81 526 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 TBK1Q9UHD2 729 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 FOXO6A8MYZ6 492 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 WDR46O15213 610 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 ALDH5A1P51649 535 aaPredicted RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 ACVR2BQ13705 512 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 ZKSCAN8Q15776 578 aaPredicted RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 WDR44Q5JSH3 913 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 TRIM72Q6ZMU5 477 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 FITM2Q8N6M3 262 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 MAB21L3Q8N8X9 362 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 RSRC1Q96IZ7 334 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 MRPL47Q9HD33 250 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 PSME4Q14997 1843 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 MYCLP12524 364 aaPredicted RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 SKIV2L2P42285 1042 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 RPS6P62753 249 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 OGFOD1Q8N543 542 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 ZCCHC9Q8N567 271 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 EXD1Q8NHP7 514 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 STAMBPL1Q96FJ0 436 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 FAM213AQ9BRX8 229 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 TMEM39BQ9GZU3 492 aa21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 RGS17Q9UGC6 210 aaPredicted RBP21.36■■□□□ 1.01
SYNGAP1-227ENST00000638142 FDX1P10109 184 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 KLRC2P26717 231 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 CLDN10P78369 228 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 IL9RQ01113 521 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 LMNB2Q03252 620 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 CCDC15Q0P6D6 951 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 NR1H3Q13133 447 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 PHLDB2Q86SQ0 1253 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 CDAN1Q8IWY9 1227 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 VCPIP1Q96JH7 1222 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 MOV10L1Q9BXT6 1211 aaKnown RBP21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 KIAA1586Q9HCI6 787 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 GSTTP1A0A1W2PQM5 241 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 RTP1P59025 263 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 CGB2Q6NT52 195 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 LLGL2Q6P1M3 1020 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 ASRGL1Q7L266 308 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 LARGE2Q8N3Y3 721 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 CEP170P1Q96L14 293 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 C9orf72Q96LT7 481 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 PDCD2LQ9BRP1 358 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 RAVER2Q9HCJ3 691 aaKnown RBP21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 PCDHA10Q9Y5I2 948 aa21.35■■□□□ 1.01
SYNGAP1-227ENST00000638142 FAM47DPA6NHR8 397 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 TMEM63BQ5T3F8 832 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 ZNF516Q92618 1163 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 LPAR1Q92633 364 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 L3MBTL3Q96JM7 780 aaPredicted RBP21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 CFAP57Q96MR6 1250 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 RBM15Q96T37 977 aaKnown RBP eCLIP21.34■■□□□ 1.011e-6■■■■□ 20.6
SYNGAP1-227ENST00000638142 UBN1Q9NPG3 1134 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 C15orf41Q9Y2V0 281 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 SCINQ9Y6U3 715 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 RASA4BC9J798 803 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 RASA4O43374 803 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 TAC1P20366 129 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 CHRNA5P30532 468 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 CETN2P41208 172 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 MAGEA4P43358 317 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 TAS2R40P59535 323 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 ZACNQ401N2 412 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 PPP1R2P3Q6NXS1 205 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 FAM83AQ86UY5 434 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 MCPH1Q8NEM0 835 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 AGAP11Q8TF27 550 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 MAML1Q92585 1016 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 BICD1Q96G01 975 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 RMDN2Q96LZ7 410 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 RMDN3Q96TC7 470 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 GMLQ99445 158 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 SENP7Q9BQF6 1050 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 PXMP2Q9NR77 195 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 ADAM22Q9P0K1 906 aa21.34■■□□□ 1.01
SYNGAP1-227ENST00000638142 EXTL3O43909 919 aa21.33■■□□□ 1.01
SYNGAP1-227ENST00000638142 RPSAP08865 295 aaKnown RBP21.33■■□□□ 1.01
SYNGAP1-227ENST00000638142 CCNB1P14635 433 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms