RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HOXA9P31269 272 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 ROR1Q01973 937 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 KCNA1Q09470 495 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 POSTNQ15063 836 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 E2F4Q16254 413 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 CTXN3Q4LDR2 81 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 SLC8B1Q6J4K2 584 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 GET4Q7L5D6 327 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 BMP8AQ7Z5Y6 402 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 GRASPQ7Z6J2 395 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 CCDC65Q8IXS2 484 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 UBALD2Q8IYN6 164 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 BEST2Q8NFU1 509 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 STRA6Q9BX79 667 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 LRRC27Q9C0I9 530 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 TNMDQ9H2S6 317 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 CUEDC2Q9H467 287 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 PCDHB8Q9UN66 801 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 PCDHB13Q9Y5F0 798 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 NFICP08651 508 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 ME1P48163 572 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 CASP5P51878 434 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 ALCAMQ13740 583 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 MRPL58Q14197 206 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 TMEM132DQ14C87 1099 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 UVSSAQ2YD98 709 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 ATL3Q6DD88 541 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 ZNF280DQ6N043 979 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 SUGP1Q8IWZ8 645 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 SYCP3Q8IZU3 236 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 IQUBQ8NA54 791 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 MYADMQ96S97 322 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 FBXL5Q9UKA1 691 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 CFAP45Q9UL16 551 aa18.19■□□□□ 0.5
CACNA1A-259ENST00000638114 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 FSHRP23945 695 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ADSSP30520 456 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ELF1P32519 619 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 NTHL1P78549 312 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 AMPD3Q01432 767 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 DNM1Q05193 864 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ZNF461Q8TAF7 563 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ASB7Q9H672 318 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 KCNK12Q9HB15 430 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 KBTBD4Q9NVX7 518 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 EPS15L1Q9UBC2 864 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 PCDHA7Q9UN72 937 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 DERAQ9Y315 318 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 DOCK6Q96HP0 2047 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ANK1P16157 1881 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 DOCK8Q8NF50 2099 aa18.18■□□□□ 0.5
CACNA1A-259ENST00000638114 ZDBF2Q9HCK1 2354 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 M0QZQ0 153 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 PRRG1O14668 218 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 PPEF2O14830 753 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 TBC1D4O60343 1298 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 ASIC1P78348 528 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 YWHAHQ04917 246 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 RTL10Q7L3V2 364 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 FBXL6Q8N531 539 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 FAM13BQ9NYF5 915 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 IGSF9Q9P2J2 1179 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 ARIH1Q9Y4X5 557 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 ZNF318Q5VUA4 2279 aa18.17■□□□□ 0.5
CACNA1A-259ENST00000638114 MUC6Q6W4X9 2439 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 POLR2DO15514 142 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 PRPF6O94906 941 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 ABLIM3O94929 683 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 CPB1P15086 417 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 AARSP49588 968 aaKnown RBP eCLIP18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 TDGQ13569 410 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 C9orf57Q5W0N0 161 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 CRELD2Q6UXH1 353 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 STXBP4Q6ZWJ1 553 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 USP37Q86T82 979 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 RSAD2Q8WXG1 361 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 HPS3Q969F9 1004 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 FAM122AQ96E09 287 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 SAAL1Q96ER3 474 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 TMEM206Q9H813 350 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 CYP4F11Q9HBI6 524 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 HCFC1R1Q9NWW0 138 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 C2CD2Q9Y426 696 aa18.16■□□□□ 0.5
CACNA1A-259ENST00000638114 IL18RAPO95256 599 aa18.15■□□□□ 0.5
CACNA1A-259ENST00000638114 PDGFBP01127 241 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-259ENST00000638114 LRG1P02750 347 aa18.15■□□□□ 0.5
CACNA1A-259ENST00000638114 POU2F2P09086 479 aa18.15■□□□□ 0.5
CACNA1A-259ENST00000638114 LAMP2P13473 410 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms