RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 TOM1L1O75674 476 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 KCTD17Q8N5Z5 321 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 LEMD2Q8NC56 503 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 ZBTB44Q8NCP5 570 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 IRF7Q92985 503 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 SECISBP2LQ93073 1101 aaKnown RBP19.53■□□□□ 0.72
CIITA-215ENST00000637439 ZNF512Q96ME7 567 aaPredicted RBP19.53■□□□□ 0.72
CIITA-215ENST00000637439 RUSC1Q9BVN2 902 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 TRMT61BQ9BVS5 477 aaKnown RBP19.53■□□□□ 0.72
CIITA-215ENST00000637439 BRD9Q9H8M2 597 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 HEBP1Q9NRV9 189 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 NCDNQ9UBB6 729 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 AFF4Q9UHB7 1163 aaKnown RBP19.53■□□□□ 0.72
CIITA-215ENST00000637439 PCDHB6Q9Y5E3 794 aa19.53■□□□□ 0.72
CIITA-215ENST00000637439 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.53■□□□□ 0.72
CIITA-215ENST00000637439 SLC16A4O15374 487 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 SEC24AO95486 1093 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 GUCY2CP25092 1073 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 MCM4P33991 863 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 SMTNP53814 917 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 MAPK7Q13164 816 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.72
CIITA-215ENST00000637439 FAM78AQ5JUQ0 283 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 DCLK2Q8N568 766 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 SPIRE2Q8WWL2 714 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 NELL1Q92832 810 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.72
CIITA-215ENST00000637439 IER2Q9BTL4 223 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 OXCT2Q9BYC2 517 aaPredicted RBP19.52■□□□□ 0.72
CIITA-215ENST00000637439 FAM126AQ9BYI3 521 aaPredicted RBP19.52■□□□□ 0.72
CIITA-215ENST00000637439 TRPV5Q9NQA5 729 aa19.52■□□□□ 0.72
CIITA-215ENST00000637439 HARSP12081 509 aaKnown RBP19.51■□□□□ 0.71
CIITA-215ENST00000637439 SDHBP21912 280 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 FCARP24071 287 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 MARCKSP29966 332 aaPredicted RBP19.51■□□□□ 0.71
CIITA-215ENST00000637439 TOB1P50616 345 aaPredicted RBP19.51■□□□□ 0.71
CIITA-215ENST00000637439 ZPBP2Q6X784 338 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 DDX12PQ92771 950 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 SMARCD2Q92925 531 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 TCEAL4Q96EI5 215 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 TBC1D32Q96NH3 1257 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 ASB16Q96NS5 453 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 PLEKHA5Q9HAU0 1116 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 DLL3Q9NYJ7 618 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 PCDHB8Q9UN66 801 aa19.51■□□□□ 0.71
CIITA-215ENST00000637439 PP2D1A8MPX8 630 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 CLDN3O15551 220 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 LILRB5O75023 590 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 PLS3P13797 630 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 CPB1P15086 417 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 PSMC3P17980 439 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 PPP2R5DQ14738 602 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 SLC10A6Q3KNW5 377 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 POTEHQ6S545 545 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 DEPDC1BQ8WUY9 529 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 ZBTB45Q96K62 511 aaPredicted RBP19.5■□□□□ 0.71
CIITA-215ENST00000637439 GPR88Q9GZN0 384 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 EPC1Q9H2F5 836 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 PRMT8Q9NR22 394 aaPredicted RBP19.5■□□□□ 0.71
CIITA-215ENST00000637439 ASAH2Q9NR71 780 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 KCND2Q9NZV8 630 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 ANKFY1Q9P2R3 1169 aa19.5■□□□□ 0.71
CIITA-215ENST00000637439 PDCD11Q14690 1871 aaKnown RBP19.5■□□□□ 0.71
CIITA-215ENST00000637439 SFI1A8K8P3 1242 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 H0YCG3 227 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 SEC24BO95487 1268 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 CDC25AP30304 524 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 CCR2P41597 374 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 EPHA5P54756 1037 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 NRLP54845 237 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 TWF1Q12792 350 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 FZD5Q13467 585 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 GRM2Q14416 872 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 ERICH6BQ5W0A0 696 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 MAMSTRQ6ZN01 415 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 KCNK18Q7Z418 384 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 TMEM161BQ8NDZ6 487 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 E2F7Q96AV8 911 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 MMTAG2Q9BU76 263 aaKnown RBP19.49■□□□□ 0.71
CIITA-215ENST00000637439 TRPV4Q9HBA0 871 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 ZNF334Q9HCZ1 680 aaPredicted RBP19.49■□□□□ 0.71
CIITA-215ENST00000637439 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.49■□□□□ 0.71
CIITA-215ENST00000637439 KIF3AQ9Y496 699 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 DNAH14Q0VDD8 3507 aa19.49■□□□□ 0.71
CIITA-215ENST00000637439 MEFVO15553 781 aaPredicted RBP19.48■□□□□ 0.71
CIITA-215ENST00000637439 YWHAHQ04917 246 aaPredicted RBP19.48■□□□□ 0.71
CIITA-215ENST00000637439 MCL1Q07820 350 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 MTAPQ13126 283 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 PLD1Q13393 1074 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 IL17AQ16552 155 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 KYAT1Q16773 422 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 HYIQ5T013 277 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 VITQ6UXI7 678 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 MAP4K3Q8IVH8 894 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 SYT2Q8N9I0 419 aaPredicted RBP19.48■□□□□ 0.71
CIITA-215ENST00000637439 CHRDQ9H2X0 955 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 CEP72Q9P209 647 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 NDRG2Q9UN36 371 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms