RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 DNM3Q9UQ16 869 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 SRPRBQ9Y5M8 271 aaKnown RBP13.77□□□□□ -0.21
CTSD-208ENST00000636843 VPS13AQ96RL7 3174 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
CTSD-208ENST00000636843 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 TKTP29401 623 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 NPTX2P47972 431 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 PEX3P56589 373 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 IQCB1Q15051 598 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 PABPC1LQ4VXU2 614 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 XKR4Q5GH76 650 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 CD300LGQ6UXG3 332 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 C1orf210Q8IVY1 113 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 IGSF22Q8N9C0 903 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 PJA1Q8NG27 643 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 HOOK1Q9UJC3 728 aaKnown RBP13.76□□□□□ -0.21
CTSD-208ENST00000636843 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 CDY1Q9Y6F8 540 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
CTSD-208ENST00000636843 DMDP11532 3685 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 LAD1O00515 517 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 PFKPQ01813 784 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 PRKCQQ04759 706 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 PTGDRQ13258 359 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 DMP1Q13316 513 aaPredicted RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 RSPO2Q6UXX9 243 aaPredicted RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 C11orf57Q6ZUT1 292 aaPredicted RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 CDT1Q9H211 546 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 PTPRHQ9HD43 1115 aa13.75□□□□□ -0.21
CTSD-208ENST00000636843 AVENQ9NQS1 362 aaPredicted RBP13.75□□□□□ -0.21
CTSD-208ENST00000636843 KANSL1LA0AUZ9 987 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 BECN2A8MW95 431 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 AP5Z1O43299 807 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ZNF500O60304 480 aaPredicted RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 SP9P0CG40 484 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 MCF2P10911 925 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 ELF1P32519 619 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 NLRP12P59046 1061 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 MLF2Q15773 248 aaPredicted RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 SLC8B1Q6J4K2 584 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 NPAS3Q8IXF0 933 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ZNF461Q8TAF7 563 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ACAP3Q96P50 834 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 DDX23Q9BUQ8 820 aaKnown RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 OSBPL6Q9BZF3 934 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 KMT5AQ9NQR1 393 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 GDE1Q9NZC3 331 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 MRPS23Q9Y3D9 190 aaKnown RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 EP300Q09472 2414 aaPredicted RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ARHGEF37A1IGU5 675 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 E9PMD0 336 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 H7C4K7 107 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 I3L4J1 428 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 PODXLO00592 558 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 SYN3O14994 580 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 HIP1RO75146 1068 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 RHOP08100 348 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 KCNE1P15382 129 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 RPL9P32969 192 aaKnown RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 PRPHP41219 470 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 BRCC3P46736 316 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ID4P47928 161 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ROR1Q01973 937 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
CTSD-208ENST00000636843 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 TAS1R3Q7RTX0 852 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ERMP1Q7Z2K6 904 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 DAW1Q8N136 415 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 CEP120Q8N960 986 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms