RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 CYP4A22Q5TCH4 519 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 SLC17A8Q8NDX2 589 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 NAP1L3Q99457 506 aaPredicted RBP20.13■□□□□ 0.81
CLN5-216ENST00000636780 TXLNGYQ9BZA5 131 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 GTF2H1P32780 548 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 NAMPTP43490 491 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 CDH8P55286 799 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 MTM1Q13496 603 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 FMNL3Q8IVF7 1028 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 TAB3Q8N5C8 712 aaPredicted RBP20.13■□□□□ 0.81
CLN5-216ENST00000636780 CCDC114Q96M63 670 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 AZI2Q9H6S1 392 aa20.13■□□□□ 0.81
CLN5-216ENST00000636780 NXF1Q9UBU9 619 aaKnown RBP20.13■□□□□ 0.81
CLN5-216ENST00000636780 PPFIA2O75334 1257 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 IQCF3P0C7M6 154 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 LIG3P49916 1009 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 KRT17Q04695 432 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 EEF1DP3Q658K8 133 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 GLIS1Q8NBF1 620 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 CCDC113Q9H0I3 377 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 CSADQ9Y600 493 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 SOCS7O14512 581 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 DKC1O60832 514 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLN5-216ENST00000636780 CREB1P16220 341 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 CHRNA3P32297 505 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 LAMTOR4Q0VGL1 99 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 PTGISQ16647 500 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 C1orf131Q8NDD1 294 aaKnown RBP20.12■□□□□ 0.81
CLN5-216ENST00000636780 FGD4Q96M96 766 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 ADAM33Q9BZ11 813 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 ASIC3Q9UHC3 531 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 POLIQ9UNA4 740 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 FAM169AQ9Y6X4 670 aa20.12■□□□□ 0.81
CLN5-216ENST00000636780 HMGB1P1B2RPK0 211 aaPredicted RBP20.11■□□□□ 0.81
CLN5-216ENST00000636780 PIK3R2O00459 728 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 ADCY3O60266 1144 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 CNMDO75829 334 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 CYP2C8P10632 490 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 MAMLD1Q13495 774 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 TARBP2Q15633 366 aaKnown RBP20.11■□□□□ 0.81
CLN5-216ENST00000636780 TMEM132AQ24JP5 1023 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 MON1BQ7L1V2 547 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 USP37Q86T82 979 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 GPC2Q8N158 579 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 ZNF606Q8WXB4 792 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 CCT8L2Q96SF2 557 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 UVRAGQ9P2Y5 699 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 CTNNAL1Q9UBT7 734 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 DIS3Q9Y2L1 958 aaKnown RBP20.11■□□□□ 0.81
CLN5-216ENST00000636780 ADGRA2Q96PE1 1338 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 ZBTB42B2RXF5 422 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 INO80B-WBP1J3KQ70 363 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 MSCO60682 206 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 MTA2O94776 668 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 CLTAP09496 248 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 NOMO3P69849 1222 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 B4GALNT4Q76KP1 1039 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 DPH6Q7L8W6 267 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 TFAP2BQ92481 460 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 INO80BQ9C086 356 aaPredicted RBP20.11■□□□□ 0.81
CLN5-216ENST00000636780 RNPEPQ9H4A4 650 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 MLXIPLQ9NP71 852 aa20.11■□□□□ 0.81
CLN5-216ENST00000636780 SAE1Q9UBE0 346 aaPredicted RBP20.11■□□□□ 0.81
CLN5-216ENST00000636780 F8VP50 259 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 TLR3O15455 904 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 ZSCAN5DPP0CG00 497 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 ETS1P14921 441 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 RTP1P59025 263 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 DHX34Q14147 1143 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 LONRF1Q17RB8 773 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 CHST13Q8NET6 341 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 DDX27Q96GQ7 796 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 RBPJLQ9UBG7 517 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 PCYOX1Q9UHG3 505 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 IGKV6D-21A0A0A0MT36 114 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 EBAG9O00559 213 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 NOP56O00567 594 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 CYP1A1P04798 512 aaPredicted RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 KRT19P08727 400 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 CLDN10P78369 228 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 SULF1Q8IWU6 871 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 ABRAQ8N0Z2 381 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 DNERQ8NFT8 737 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 SELENOSQ9BQE4 189 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 SLC12A6Q9UHW9 1150 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 STYXL1Q9Y6J8 313 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 ARID2Q68CP9 1835 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 ICAM3P32942 547 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 OGDHQ02218 1023 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 ZNF473Q8WTR7 871 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 NIFKQ9BYG3 293 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 PABPC3Q9H361 631 aaKnown RBP20.1■□□□□ 0.81
CLN5-216ENST00000636780 EFCC1Q9HA90 598 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 AAASQ9NRG9 546 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 NRBP2Q9NSY0 501 aa20.1■□□□□ 0.81
CLN5-216ENST00000636780 SH3D19Q5HYK7 790 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms