RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 SEMA4DQ92854 862 aa16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 FNBP1Q96RU3 617 aa16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 SENP6Q9GZR1 1112 aaPredicted RBP16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 SIX2Q9NPC8 291 aa16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 PIN4Q9Y237 131 aaKnown RBP16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 HES2Q9Y543 173 aa16.55■□□□□ 0.24
CHRNA7-217ENST00000636603 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 TCP1P17987 556 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 MXI1P50539 228 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 ATN1P54259 1190 aaPredicted RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 NFX1Q12986 1120 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 PTK7Q13308 1070 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 ZSCAN26Q16670 478 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 TRIM71Q2Q1W2 868 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 SV2AQ7L0J3 742 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 RNF10Q8N5U6 811 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 OR5B17Q8NGF7 314 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 U2AF1L4Q8WU68 220 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 CXCL16Q9H2A7 254 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 AGO3Q9H9G7 860 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 TRIP11Q15643 1979 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 ANK1P16157 1881 aa16.54■□□□□ 0.24
CHRNA7-217ENST00000636603 A0A087X0T9 212 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 FAM228BP0C875 321 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 TNNT3P45378 269 aaPredicted RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 PKN2Q16513 984 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 BRSK2Q8IWQ3 736 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 LMO3Q8TAP4 145 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 MS4A14Q96JA4 679 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 INTS2Q9H0H0 1204 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 RNF40O75150 1001 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 MCF2P10911 925 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 GHRP10912 638 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 ACTN2P35609 894 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 NAB2Q15742 525 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 TDRD12Q587J7 1177 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 PACSIN1Q9BY11 444 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 ST3GAL5Q9UNP4 418 aa16.53■□□□□ 0.24
CHRNA7-217ENST00000636603 GTPBP10A4D1E9 387 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 RPS6KA5O75582 802 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 GGCXP38435 758 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 SLC7A5Q01650 507 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 PTPN11Q06124 597 aaPredicted RBP16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 SLC18A3Q16572 532 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 TDRD10Q5VZ19 366 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 NOTUMQ6P988 496 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 IRF2BP2Q7Z5L9 587 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 RPAINQ86UA6 219 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 NOX5Q96PH1 765 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 ADPGKQ9BRR6 497 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 PI4K2AQ9BTU6 479 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 APOL6Q9BWW8 343 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 TMEM8AQ9HCN3 771 aa16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-217ENST00000636603 LACTBL1A8MY62 500 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 TULP2O00295 520 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 SGPL1O95470 568 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 CKBP12277 381 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 CDK7P50613 346 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 CLDN10P78369 228 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 KRT39Q6A163 491 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 IQCEQ6IPM2 695 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 PHLDB3Q6NSJ2 640 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 SLC27A1Q6PCB7 646 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 EFCAB13Q8IY85 973 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 SNTG2Q9NY99 539 aa16.52■□□□□ 0.23
CHRNA7-217ENST00000636603 PALMO75781 387 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 C4BPAP04003 597 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 UCHL3P15374 230 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 CD52P31358 61 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 SLC10A6Q3KNW5 377 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 UBXN11Q5T124 520 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 CGRRF1Q99675 332 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 MTMR12Q9C0I1 747 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 ACBD3Q9H3P7 528 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 CITO14578 2027 aa16.51■□□□□ 0.23
CHRNA7-217ENST00000636603 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
CHRNA7-217ENST00000636603 VNN1O95497 513 aa16.5■□□□□ 0.23
CHRNA7-217ENST00000636603 CLTAP09496 248 aa16.5■□□□□ 0.23
CHRNA7-217ENST00000636603 AKAP5P24588 427 aa16.5■□□□□ 0.23
CHRNA7-217ENST00000636603 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
CHRNA7-217ENST00000636603 BIRC3Q13489 604 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms