RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CYP26A1O43174 497 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 LAMC2Q13753 1193 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 NEUROD4Q9HD90 331 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
CLN5-208ENST00000636183 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 MCF2P10911 925 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 VN1R5Q7Z5H4 357 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 PSD3Q9NYI0 1048 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 RNF103-CHMP3A0A140T963 221 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 H2AFYO75367 372 aaKnown RBP16.91■□□□□ 0.3
CLN5-208ENST00000636183 EPHB3P54753 998 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 CDC16Q13042 620 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 CDR2LQ86X02 465 aaPredicted RBP16.91■□□□□ 0.3
CLN5-208ENST00000636183 NUP93Q8N1F7 819 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 IPMKQ8NFU5 416 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 ANKRD49Q8WVL7 239 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 C18orf8Q96DM3 657 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 THG1LQ9NWX6 298 aaKnown RBP16.91■□□□□ 0.3
CLN5-208ENST00000636183 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 PLA2G4CQ9UP65 541 aa16.91■□□□□ 0.3
CLN5-208ENST00000636183 SEC31AO94979 1220 aaKnown RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 PGK2P07205 417 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 SLC11A2P49281 568 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 KLHL38Q2WGJ6 581 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 TUBB6Q9BUF5 446 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 CEP72Q9P209 647 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 SKIP12755 728 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 VCLP18206 1134 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 SNCBQ16143 134 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 MLXIPLQ9NP71 852 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 SPACA6W5XKT8 324 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 KRT14P02533 472 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 FGFR1P11362 822 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 TCF7P36402 384 aaPredicted RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 ALDH18A1P54886 795 aaKnown RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 SHCBP1Q8NEM2 672 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 PDGFRAP16234 1089 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 LLGL2Q6P1M3 1020 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 SENP7Q9BQF6 1050 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 RGS12O14924 1447 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 MAPK13O15264 365 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 B3GAT3O94766 335 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 MIB1Q86YT6 1006 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 ANKMY2Q8IV38 441 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 PCSK9Q8NBP7 692 aaKnown RBP16.9■□□□□ 0.3
CLN5-208ENST00000636183 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 PLEKHA8Q96JA3 519 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 FAM161BQ96MY7 647 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 TXLNGQ9NUQ3 528 aa16.9■□□□□ 0.3
CLN5-208ENST00000636183 MYO1GB0I1T2 1018 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 C6orf10Q5SRN2 563 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 C6orf118Q5T5N4 469 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 PDXDC1Q6P996 788 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 RGS9BPQ6ZS82 235 aa16.89■□□□□ 0.3
CLN5-208ENST00000636183 NDUFB10O96000 172 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ZNF445P59923 1031 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 MED21Q13503 144 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 NCOA4Q13772 614 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
CLN5-208ENST00000636183 HIST2H2ACQ16777 129 aaPredicted RBP16.89■□□□□ 0.29
CLN5-208ENST00000636183 HIST2H2AA3Q6FI13 130 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 FAM47EQ6ZV65 393 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ANGPTL2Q9UKU9 493 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 PCDHB9Q9Y5E1 797 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 MYBL1P10243 752 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 KRT20P35900 424 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 BTKQ06187 659 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ORC4O43929 436 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 SLC30A5Q8TAD4 765 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 NFU1Q9UMS0 254 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 PODXLO00592 558 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 CYP7B1O75881 506 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 GRIN1Q05586 938 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 PITPNM3Q9BZ71 974 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 HEATR9A2RTY3 570 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 HBP1O60381 514 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 TRIM32Q13049 653 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 CTXN3Q4LDR2 81 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 RHOT1Q8IXI2 618 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ARL8AQ96BM9 186 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
CLN5-208ENST00000636183 ALDH6A1Q02252 535 aaKnown RBP16.88■□□□□ 0.29
CLN5-208ENST00000636183 MLNP12872 115 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms