RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	TH	P07101	528 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	KRT19	P08727	400 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	LRPAP1	P30533	357 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	POLR2B	P30876	1174 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SCNN1G	P51170	649 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	MFAP3	P55082	362 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RBP5	P82980	135 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RAPGEF1	Q13905	1077 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	IKBKE	Q14164	716 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	MEA1	Q16626	185 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ZNF699	Q32M78	642 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CLLU1OS	Q5K130	101 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	C9orf57	Q5W0N0	161 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	E4F1	Q66K89	784 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SPOPL	Q6IQ16	392 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ENOSF1	Q7L5Y1	443 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TMEM139	Q8IV31	216 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PPM1K	Q8N3J5	372 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	LRRC52	Q8N7C0	313 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	KAT5	Q92993	513 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TATDN2	Q93075	761 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ELMO3	Q96BJ8	720 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FAXDC2	Q96IV6	333 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	KREMEN1	Q96MU8	473 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SPAG5	Q96R06	1193 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.31	□□□□□ -0.76	7e-11	■■■■■ 260.8
CACNA1A-223	ENST00000636058	SLC38A7	Q9NVC3	462 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	AIPL1	Q9NZN9	384 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	AGAP1	Q9UPQ3	857 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	NUB1	Q9Y5A7	615 aa		10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TDRD15	B5MCY1	1934 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TTC3	P53804	2025 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FGFR1	P11362	822 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	IBSP	P21815	317 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TBXAS1	P24557	533 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ASPA	P45381	313 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CCZ1B	P86790	482 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CCZ1	P86791	482 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CDK17	Q00537	523 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	GRIK3	Q13003	919 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CUL2	Q13617	745 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	DRAP1	Q14919	205 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SFMBT2	Q5VUG0	894 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SMYD5	Q6GMV2	418 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	WDR59	Q6PJI9	974 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	GLB1L	Q6UWU2	654 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RPUSD2	Q8IZ73	545 aa	Known RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CCDC112	Q8NEF3	446 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SHC3	Q92529	594 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	JAKMIP2	Q96AA8	810 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TRIM44	Q96DX7	344 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	HPDL	Q96IR7	371 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ZNF830	Q96NB3	372 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ARID3A	Q99856	593 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	BAG1	Q99933	345 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	HTATIP2	Q9BUP3	242 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	NIF3L1	Q9GZT8	377 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	GOLGA2P5	Q9HBQ8	144 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RNF216	Q9NWF9	866 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PRKAG2	Q9UGJ0	569 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PCDHB7	Q9Y5E2	793 aa		10.3	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FOXN3	O00409	490 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PPEF2	O14830	753 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	HOXA2	O43364	376 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	EFCAB14	O75071	495 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	POMC	P01189	267 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PNMA6A	P0CW24	399 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ACO1	P21399	889 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SOX5	P35711	763 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PNPLA4	P41247	253 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	STAT1	P42224	750 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	MYO1E	Q12965	1108 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TUSC3	Q13454	348 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ARHGAP44	Q17R89	818 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TSR1	Q2NL82	804 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ZNF667	Q5HYK9	610 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	NOMO2	Q5JPE7	1267 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	IRF2BP2	Q7Z5L9	587 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	NPAS4	Q8IUM7	802 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FMNL3	Q8IVF7	1028 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	C7orf61	Q8IZ16	206 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	UBR7	Q8N806	425 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RSPH1	Q8WYR4	309 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	BCO2	Q9BYV7	579 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	IL23A	Q9NPF7	189 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	KANSL3	Q9P2N6	904 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	LRFN2	Q9ULH4	789 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	INPP5F	Q9Y2H2	1132 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SCN1A	P35498	2009 aa		10.29	□□□□□ -0.76
CACNA1A-223	ENST00000636058	COL4A6	Q14031	1691 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	BAIAP3	O94812	1187 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CLSTN1	O94985	981 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	SERPING1	P05155	500 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ACR	P10323	421 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms