RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 AIPL1Q9NZN9 384 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 CXXC1Q9P0U4 656 aaPredicted RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 TMEM59LQ9UK28 342 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 PADI3Q9ULW8 664 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 NCK2O43639 380 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 FGBP02675 491 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 PFKMP08237 780 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 DARSP14868 501 aaKnown RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 BIRC3Q13489 604 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 CNKSR3Q6P9H4 555 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 ZNF410Q86VK4 478 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
CLN8-209ENST00000635970 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 ISCUQ9H1K1 167 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 MINDY3Q9H8M7 445 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 CAPN7Q9Y6W3 813 aa16.62■□□□□ 0.25
CLN8-209ENST00000635970 PALMO75781 387 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 ANXA13P27216 316 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 KCNMA1Q12791 1236 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
CLN8-209ENST00000635970 TAX1BP1Q86VP1 789 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 USP38Q8NB14 1042 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 TAF4BQ92750 862 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 PSMB7Q99436 277 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 KIFC3Q9BVG8 833 aa16.61■□□□□ 0.25
CLN8-209ENST00000635970 BZW2Q9Y6E2 419 aaKnown RBP16.61■□□□□ 0.25
CLN8-209ENST00000635970 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 BUB1O43683 1085 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ZCWPW2Q504Y3 356 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 NLRP14Q86W24 1093 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 TDHQ8IZJ6 230 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 SEPT8Q92599 483 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 GCOM2Q9BZD3 368 aaPredicted RBP16.6■□□□□ 0.25
CLN8-209ENST00000635970 ACTR5Q9H9F9 607 aaPredicted RBP16.6■□□□□ 0.25
CLN8-209ENST00000635970 TMBIM4Q9HC24 238 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ASAP2O43150 1006 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 MTMR3Q13615 1198 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 DYMQ7RTS9 669 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 CASKIN2Q8WXE0 1202 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 LINC01599Q8WXQ3 324 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 KIFAP3Q92845 792 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 MS4A14Q96JA4 679 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 KCND2Q9NZV8 630 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 SQORQ9Y6N5 450 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
CLN8-209ENST00000635970 CDH23Q9H251 3354 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
CLN8-209ENST00000635970 FAM153BP0C7A2 387 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 MYZAPP0CAP1 466 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 ATP1A2P50993 1020 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 SMTNP53814 917 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 PEX3P56589 373 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 CDC42EP1Q00587 391 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 GIT2Q14161 759 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 TFDP1Q14186 410 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 FAM153CQ494X1 144 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 KCTD16Q68DU8 428 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 TMCO2Q7Z6W1 182 aaPredicted RBP16.59■□□□□ 0.25
CLN8-209ENST00000635970 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 HERVK_113Q902F9 699 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 P3H4Q92791 437 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 KRT12Q99456 494 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 EHD2Q9NZN4 543 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 FAM153AQ9UHL3 310 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 TRIOBPQ9H2D6 2365 aa16.59■□□□□ 0.25
CLN8-209ENST00000635970 CCDC188H7C350 402 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 MGEA5O60502 916 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 NOL4O94818 638 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 ACTN1P12814 892 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 PHKA2P46019 1235 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 PTENP60484 403 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 DEFB103AP81534 67 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.25
CLN8-209ENST00000635970 CCDC40Q4G0X9 1142 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 FBXW10Q5XX13 1052 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.25
CLN8-209ENST00000635970 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.254e-6■■■■□ 20
CLN8-209ENST00000635970 DDX12PQ92771 950 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 APBB2Q92870 758 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.25
CLN8-209ENST00000635970 GOLGA6L7A0A1B0GV03 622 aa16.58■□□□□ 0.24
CLN8-209ENST00000635970 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.58■□□□□ 0.24
CLN8-209ENST00000635970 BHMG1C9JSJ3 638 aaPredicted RBP16.58■□□□□ 0.24
CLN8-209ENST00000635970 INO80B-WBP1J3KQ70 363 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms