RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
CLN6-211ENST00000635754 TNNI1P19237 187 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 IGFBP6P24592 240 aaPredicted RBP16.73■□□□□ 0.27
CLN6-211ENST00000635754 CCNE1P24864 410 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 CASP4P49662 377 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 CREMQ03060 361 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 HYAL1Q12794 435 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
CLN6-211ENST00000635754 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 PDXDC1Q6P996 788 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 CD300LGQ6UXG3 332 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 CEP57Q86XR8 500 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 GPR65Q8IYL9 337 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
CLN6-211ENST00000635754 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 EMILIN2Q9BXX0 1053 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 MTMR12Q9C0I1 747 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 IGFLR1Q9H665 355 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 R3HCC1Q9Y3T6 440 aaKnown RBP16.73■□□□□ 0.27
CLN6-211ENST00000635754 COL6A3P12111 3177 aa16.73■□□□□ 0.27
CLN6-211ENST00000635754 BICDL2A1A5D9 508 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PIRO00625 290 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PER2O15055 1255 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 CETN3O15182 167 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 ITGB3P05106 788 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 FGFR3P22607 806 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PAX3P23760 479 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PSMC2P35998 433 aaKnown RBP16.72■□□□□ 0.27
CLN6-211ENST00000635754 DUSP6Q16828 381 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 KIAA0319Q5VV43 1072 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 USP37Q86T82 979 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 SUSD3Q96L08 255 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 ZNF560Q96MR9 790 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLN6-211ENST00000635754 CTNND2Q9UQB3 1225 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 SCN1AP35498 2009 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
CLN6-211ENST00000635754 TRIM49BA6NDI0 452 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 PPEF2O14830 753 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 SYN3O14994 580 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 AKAP3O75969 853 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 KRT19P08727 400 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 POLR2BP30876 1174 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLN6-211ENST00000635754 PNPLA4P41247 253 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 PMS1P54277 932 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 FKBP3Q00688 224 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 PAK1Q13153 545 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 INTS8Q75QN2 995 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 FAM186BQ8IYM0 893 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 PARD3BQ8TEW8 1205 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 NELFBQ8WX92 580 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 PIK3R5Q8WYR1 880 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 PABPC5Q96DU9 382 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 FAM84AQ96KN4 292 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 POP1Q99575 1024 aaKnown RBP16.71■□□□□ 0.27
CLN6-211ENST00000635754 CLDND1Q9NY35 253 aa16.71■□□□□ 0.27
CLN6-211ENST00000635754 LILRB3O75022 631 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 ADH1AP07327 375 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 CNPP09543 421 aaKnown RBP16.7■□□□□ 0.26
CLN6-211ENST00000635754 EPB41P11171 864 aaKnown RBP16.7■□□□□ 0.26
CLN6-211ENST00000635754 KRT13P13646 458 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 PTMSP20962 102 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 AARSP49588 968 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLN6-211ENST00000635754 TAF6P49848 677 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 AP3M2P53677 418 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 LILRA4P59901 499 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 PSMD5Q16401 504 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
CLN6-211ENST00000635754 DSTYKQ6XUX3 929 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 EP400NLQ6ZTU2 488 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 ANKS3Q6ZW76 656 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 MLKLQ8NB16 471 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 TMC2Q8TDI7 906 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 HLA-CQ95604 372 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 RXFP1Q9HBX9 757 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 TSC2P49815 1807 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 ARHGEF37A1IGU5 675 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 LRRIQ3A6PVS8 624 aaPredicted RBP16.7■□□□□ 0.26
CLN6-211ENST00000635754 M0QZQ0 153 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 SLC16A3O15427 465 aaKnown RBP16.7■□□□□ 0.26
CLN6-211ENST00000635754 SRGAP2BP0DMP2 458 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 KLRC2P26717 231 aa16.7■□□□□ 0.26
CLN6-211ENST00000635754 VAMP7P51809 220 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms