RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 STC2O76061 302 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 CNOT4O95628 575 aaKnown RBP7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 BRAFP15056 766 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 ABCB4P21439 1286 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 AFF3P51826 1226 aaKnown RBP7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 KIF22Q14807 665 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 CCDC93Q567U6 631 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 C3orf38Q5JPI3 329 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 ANKS6Q68DC2 871 aa7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 TNPO1Q92973 898 aaKnown RBP7.4□□□□□ -1.22
SMARCA2-240ENST00000635392 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 A0A1W2PPC4 97 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 TRIM43BA6NCK2 446 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 PJA2O43164 708 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 NOBOXO60393 691 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 ABHD16AO95870 558 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 MTHFD1P11586 935 aaKnown RBP7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 SLURP1P55000 103 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 NPEPPSP55786 919 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 LINC00310P59036 64 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 DUSP8Q13202 625 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 RIN1Q13671 783 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 VMACQ2NL98 169 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 TMEM95Q3KNT9 176 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 CIAPIN1Q6FI81 312 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 GPRIN1Q7Z2K8 1008 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 TRIM43Q96BQ3 446 aaPredicted RBP7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 VPS11Q9H270 941 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 CNNM1Q9NRU3 951 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 GNL3LQ9NVN8 582 aaKnown RBP7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 NCDNQ9UBB6 729 aa7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 AFF4Q9UHB7 1163 aaKnown RBP7.39□□□□□ -1.23
SMARCA2-240ENST00000635392 KIF21AQ7Z4S6 1674 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 RFXAPO00287 272 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 TSPAN15O95858 294 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 FGAP02671 866 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 RAP2AP10114 183 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 ATP5JP18859 108 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 HALP42357 657 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 BMT2Q1RMZ1 405 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 FAM214AQ32MH5 1076 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 KLHDC7AQ5VTJ3 777 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 LIX1LQ8IVB5 337 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 NKAPQ8N5F7 415 aaKnown RBP7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 GIMAP8Q8ND71 665 aaPredicted RBP7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 BHLHE22Q8NFJ8 381 aaPredicted RBP7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 HERPUD2Q9BSE4 406 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 PNPLA8Q9NP80 782 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 JKAMPQ9P055 326 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 CDC23Q9UJX2 597 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 SLC45A2Q9UMX9 530 aa7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMARCA2-240ENST00000635392 WDR62O43379 1518 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 BTN3A1O00481 513 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 B4GALT4O60513 344 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 NBNO60934 754 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 DNAJB5O75953 348 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 GJB1P08034 283 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PARP1P09874 1014 aaKnown RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PHKA1P46020 1223 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PTH1RQ03431 593 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PMS2P11Q13670 270 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 ZNF529Q6P280 563 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 ATP11CQ8NB49 1132 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 SHCBP1Q8NEM2 672 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 ATXN2LQ8WWM7 1075 aaKnown RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PPP1R16BQ96T49 567 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 LSM14BQ9BX40 385 aaKnown RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 ARFGAP3Q9NP61 516 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 SACM1LQ9NTJ5 587 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 RLIMQ9NVW2 624 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 FBXO34Q9NWN3 711 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 RGS17Q9UGC6 210 aaPredicted RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 PCDHGB2Q9Y5G2 931 aa7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 THOC2Q8NI27 1593 aaKnown RBP7.37□□□□□ -1.23
SMARCA2-240ENST00000635392 A0A087WV62 115 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 CCDC189A1A4V9 331 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 TBKBP1A7MCY6 615 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 C8AP07357 584 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 SNRPA1P09661 255 aaKnown RBP7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 CLRN1P58418 232 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 RPS16P62249 146 aaKnown RBP7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 NOMO3P69849 1222 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 CREMQ03060 361 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 KCNA10Q16322 511 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 ANO1Q5XXA6 986 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 ZNF365Q70YC5 407 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 PDSS2Q86YH6 399 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 OR6B3Q8NGW1 331 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 NEIL1Q96FI4 390 aaPredicted RBP7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 GDF15Q99988 308 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 TTLL2Q9BWV7 592 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 BRIP1Q9BX63 1249 aa7.36□□□□□ -1.23
SMARCA2-240ENST00000635392 GPR35Q9HC97 309 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms