RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 GPR141Q7Z602 305 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 DPP9Q86TI2 863 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 KCNB2Q92953 911 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CATSPER2Q96P56 530 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 GABBR1Q9UBS5 961 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 HAO1Q9UJM8 370 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 COPG1Q9Y678 874 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 ZHX2Q9Y6X8 837 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 MYBP10242 640 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 PTK7Q13308 1070 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 MRPL1Q9BYD6 325 aaKnown RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 C15orf41Q9Y2V0 281 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUSP10Q9Y6W6 482 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 A0A1B0GW55 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 IQCA1LA6NCM1 817 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 F5H6K3 240 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 O00370 1275 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 KCNN4O15554 427 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L2P0CJ85 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L3P0CJ86 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L4P0CJ87 422 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L5P0CJ88 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L6P0CJ89 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4L7P0CJ90 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 GHRP10912 638 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 KLRC3Q07444 240 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 Q3C1V9 767 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 ITPRIPL1Q6GPH6 555 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 PPP1R36Q96LQ0 422 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DUX4Q9UBX2 424 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 ZC3H7BQ9UGR2 993 aaKnown RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 AGO2Q9UKV8 859 aaKnown RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 HPSEQ9Y251 543 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 CAPN6Q9Y6Q1 641 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 TBC1D4O60343 1298 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 ASNSP08243 561 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 PPARGP37231 505 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 DNAJC3Q13217 504 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 CCDC103Q8IW40 242 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 FAM167AQ96KS9 214 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 BRD8Q9H0E9 1235 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 SLC13A4Q9UKG4 626 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 AIM2O14862 343 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 XPAP23025 273 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 CCNA1P78396 465 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 LMBRD2Q68DH5 695 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 TTC33Q6PID6 262 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 RAVER2Q9HCJ3 691 aaKnown RBP12.25□□□□□ -0.45
COL11A1-211ENST00000635193 HECW2Q9P2P5 1572 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 ABCA6Q8N139 1617 aa12.25□□□□□ -0.45
COL11A1-211ENST00000635193 ATP9AO75110 1047 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 DLGAP3O95886 979 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 MLH1P40692 756 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 UBE3AQ05086 875 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 SWSAP1Q6NVH7 229 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 DSTYKQ6XUX3 929 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 CLEC4FQ8N1N0 589 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 KLF6Q99612 283 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 FAM129AQ9BZQ8 928 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 EPB41L4AQ9HCS5 686 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 STAP1Q9ULZ2 295 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 NEMP1O14524 444 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 HSPA1AP0DMV8 641 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 HSPA1BP0DMV9 641 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 AKR1B1P15121 316 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ATXN3P54252 364 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 HERVK_113P62684 666 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 RNF135Q8IUD6 432 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF513Q8N8E2 541 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 NSUN4Q96CB9 384 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 FAM118BQ9BPY3 351 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ABCF3Q9NUQ8 709 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ANGPT2O15123 496 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 RAD17O75943 681 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 AP3M2P53677 418 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 ACTR2P61160 394 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
COL11A1-211ENST00000635193 TBCCQ15814 346 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 WLSQ5T9L3 541 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 INPP5DQ92835 1189 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 MIEF2Q96C03 454 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
COL11A1-211ENST00000635193 MAGEB5Q9BZ81 275 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms