RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FRMD4BQ9Y2L6 1034 aa3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CFAP20Q9Y6A4 193 aaKnown RBP3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MYBBP1AQ9BQG0 1328 aaKnown RBP3.87□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SHTN1A0MZ66 631 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PROM1O43490 865 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ARIH2O95376 493 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 C1RP00736 705 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 AMY1AP04745 511 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SRGNP10124 158 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MPLP40238 635 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ADKP55263 362 aaKnown RBP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SOX10P56693 466 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PIGFQ07326 219 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ZNF169Q14929 603 aaPredicted RBP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CYP2A13Q16696 494 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GPR149Q86SP6 731 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 DDX42Q86XP3 938 aaKnown RBP eCLIP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 IL17RDQ8NFM7 739 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SMG7Q92540 1137 aaKnown RBP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RNF31Q96EP0 1072 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TEX101Q9BY14 249 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TDP1Q9NUW8 608 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SIDT1Q9NXL6 827 aaKnown RBP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 JKAMPQ9P055 326 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC17A6Q9P2U8 582 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 LRIT1Q9P2V4 623 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MTO1Q9Y2Z2 717 aaKnown RBP3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ACTL7AQ9Y615 435 aa3.86□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 KLHL33A6NCF5 533 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 UNC119BA6NIH7 251 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NDUFS2O75306 463 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FTH1P19P0C7X4 201 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FPR1P21462 350 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 POU6F2P78424 691 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NHLH1Q02575 133 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FOXI1Q12951 378 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CLNKQ7Z7G1 428 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PDSS2Q86YH6 399 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SIMC1Q8NDZ2 872 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CCHCR1Q8TD31 782 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 COG1Q8WTW3 980 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PHACTR3Q96KR7 559 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PACSIN1Q9BY11 444 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 UNKLQ9H9P5 680 aaKnown RBP3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GNL3LQ9NVN8 582 aaKnown RBP3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FBXO34Q9NWN3 711 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 KCTD5Q9NXV2 234 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TLK1Q9UKI8 766 aa3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SETD1BQ9UPS6 1966 aaKnown RBP3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 COL3A1P02461 1466 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PRAMEF33A0A0G2JMD5 474 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SLC16A6O15403 523 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PRAMEF10O60809 474 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SOAT2O75908 522 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 KCNA2P16389 499 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PTH2RP49190 550 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RARRES1P49788 294 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FXR1P51114 621 aaKnown RBP eCLIP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PTTG1IPP53801 180 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CACNA2D1P54289 1103 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RPS7P62081 194 aaKnown RBP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 HSD11B2P80365 405 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MRPS35P82673 323 aaKnown RBP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ZNF844Q08AG5 666 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 HLXQ14774 488 aaPredicted RBP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 THEMIS2Q5TEJ8 643 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 KIAA0895LQ68EN5 471 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ZNF365Q70YC5 407 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 GRASPQ7Z6J2 395 aaPredicted RBP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TTC7BQ86TV6 843 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RSPH3Q86UC2 560 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 RHOT1Q8IXI2 618 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CBARPQ8N350 705 aaPredicted RBP3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 ZNF366Q8N895 744 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 OR2I1PQ8NGU4 316 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 IFI44Q8TCB0 444 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 NRG4Q8WWG1 115 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 FAXDC2Q96IV6 333 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 PDLIM2Q96JY6 352 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 Q96MF0 132 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 BRINP2Q9C0B6 783 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 SIK2Q9H0K1 926 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CASS4Q9NQ75 786 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 INTS13Q9NVM9 706 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 MAP3K2Q9Y2U5 619 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 CADPSQ9ULU8 1353 aa3.84□□□□□ -1.79
NPHP3-ACAD11-202ENST00000632629 TRGV11A0A075B6L2 103 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MPPED1O15442 326 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DTNBO60941 627 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC43A1O75387 559 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CHEK2O96017 543 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 WT1P19544 449 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CYP2C19P33261 490 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FOLR3P41439 243 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLFN5Q08AF3 891 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CLUL1Q15846 466 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PGM2L1Q6PCE3 622 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 UBE3BQ7Z3V4 1068 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms