RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ZNF280BQ86YH2 543 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 BRSK2Q8IWQ3 736 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 CSGALNACT2Q8N6G5 542 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 FAM193BQ96PV7 902 aaPredicted RBP20.21■□□□□ 0.83
PNKP-224ENST00000631020 PLEKHA5Q9HAU0 1116 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 TOPORSQ9NS56 1045 aaPredicted RBP20.21■□□□□ 0.83
PNKP-224ENST00000631020 RBAKQ9NYW8 714 aaPredicted RBP20.21■□□□□ 0.83
PNKP-224ENST00000631020 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
PNKP-224ENST00000631020 SMIM28A0A1B0GU29 152 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 CETN3O15182 167 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 GPR37L1O60883 481 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 DDHD2O94830 711 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 POMCP01189 267 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 ALDH2P05091 517 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 SPAG1Q07617 926 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 GLRA4Q5JXX5 417 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 PLEKHO2Q8TD55 490 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 SUSD6Q92537 303 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 CASP10Q92851 521 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 SRRTQ9BXP5 876 aaKnown RBP20.2■□□□□ 0.82
PNKP-224ENST00000631020 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
PNKP-224ENST00000631020 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
PNKP-224ENST00000631020 CITO14578 2027 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 B4GALT3O60512 393 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 KCNE1P15382 129 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 CYP24A1Q07973 514 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 NAB2Q15742 525 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 BCL7CQ8WUZ0 217 aaPredicted RBP20.19■□□□□ 0.82
PNKP-224ENST00000631020 BORCS6Q96GS4 357 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 FRMD4BQ9Y2L6 1034 aa20.19■□□□□ 0.82
PNKP-224ENST00000631020 CXCL14O95715 111 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 PSMC2P35998 433 aaKnown RBP20.18■□□□□ 0.82
PNKP-224ENST00000631020 RBM10P98175 930 aaKnown RBP20.18■□□□□ 0.82
PNKP-224ENST00000631020 PPP2R3AQ06190 1150 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 DSC1Q08554 894 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 ZBTB6Q15916 424 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 FILIP1Q7Z7B0 1213 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 ENOX1Q8TC92 643 aaKnown RBP20.18■□□□□ 0.82
PNKP-224ENST00000631020 CEP63Q96MT8 703 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 PPP1R10Q96QC0 940 aaKnown RBP20.18■□□□□ 0.82
PNKP-224ENST00000631020 S1PR5Q9H228 398 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 ASB7Q9H672 318 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 FAN1Q9Y2M0 1017 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 HCFC2Q9Y5Z7 792 aa20.18■□□□□ 0.82
PNKP-224ENST00000631020 MAPK13O15264 365 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 DCXO43602 365 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 PSMD6Q15008 389 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 TMEM31Q5JXX7 168 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 SPATA1Q5VX52 437 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 JADE1Q6IE81 842 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 IRF2BP1Q8IU81 584 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 CD302Q8IX05 232 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 COLGALT2Q8IYK4 626 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 FAM186BQ8IYM0 893 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 FAM84AQ96KN4 292 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 RPS6KC1Q96S38 1066 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 MKNK1Q9BUB5 465 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 PHF7Q9BWX1 381 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 ANK1P16157 1881 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 TULP1O00294 542 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 NRP1O14786 923 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 CLASP2O75122 1294 aaKnown RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 IL18RAPO95256 599 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 THP07101 528 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 NFICP08651 508 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 MCCD1P59942 119 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 DLG4P78352 724 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 SOX4Q06945 474 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 CBX2Q14781 532 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 SYCE2Q6PIF2 218 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 PARD3BQ8TEW8 1205 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 C18orf25Q96B23 403 aaPredicted RBP20.17■□□□□ 0.82
PNKP-224ENST00000631020 CCDC127Q96BQ5 260 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 VN1R3Q9BXE9 311 aa20.17■□□□□ 0.82
PNKP-224ENST00000631020 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.16■□□□□ 0.82
PNKP-224ENST00000631020 LOC730098B7Z3J9 87 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 COL9A1P20849 921 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 ZNF165P49910 485 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 ZNF445P59923 1031 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 GRIK3Q13003 919 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 NCAPHQ15003 741 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 PTPN14Q15678 1187 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 C1orf220Q5T0J3 134 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 LRSAM1Q6UWE0 723 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 PPFIBP1Q86W92 1011 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 KIF12Q96FN5 646 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 BPIFA3Q9BQP9 254 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 C11orf16Q9NQ32 467 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 DZANK1Q9NVP4 752 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 CACNG4Q9UBN1 327 aa20.16■□□□□ 0.82
PNKP-224ENST00000631020 SLC16A3O15427 465 aaKnown RBP20.15■□□□□ 0.82
PNKP-224ENST00000631020 EFEMP2O95967 443 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 EPB41P11171 864 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms