RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 TDHQ8IZJ6 230 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 C1orf127Q8N9H9 656 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 RABGGTAQ92696 567 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 RAD9AQ99638 391 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 NDST4Q9H3R1 872 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 CACNG4Q9UBN1 327 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 DNAJB4Q9UDY4 337 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
SGMS1-211ENST00000626236 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
SGMS1-211ENST00000626236 LAMA2P24043 3122 aaKnown RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 GOLGA6L3A6NEY3 463 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 PODXLO00592 558 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 B4GALT3O60512 393 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 N4BP1O75113 896 aaKnown RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 VNN1O95497 513 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 POLR2BP30876 1174 aaKnown RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 SCN1AP35498 2009 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 PIK3CAP42336 1068 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 CLCNKBP51801 687 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 DSC1Q08554 894 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 CETN1Q12798 172 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 TRPC3Q13507 836 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 ZACNQ401N2 412 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 FILIP1LQ4L180 1135 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 FKBP15Q5T1M5 1219 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 C9orf57Q5W0N0 161 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 C15orf39Q6ZRI6 1047 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 APTXQ7Z2E3 356 aaKnown RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 COLGALT2Q8IYK4 626 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 FIBCD1Q8N539 461 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 TAS1R2Q8TE23 839 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 UROC1Q96N76 676 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 PAAF1Q9BRP4 392 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 CWH43Q9H720 699 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 NRDE2Q9H7Z3 1164 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.946e-6■■■□□ 15
SGMS1-211ENST00000626236 IFNKQ9P0W0 207 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 SIX4Q9UIU6 781 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 AGAP1Q9UPQ3 857 aa9.18□□□□□ -0.94
SGMS1-211ENST00000626236 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
SGMS1-211ENST00000626236 PLXNA4Q9HCM2 1894 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 TSC2P49815 1807 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 LCHNA4D1U4 455 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 LRRC10BA6NIK2 292 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 LGALS16A8MUM7 142 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 PIRO00625 290 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 PPEF2O14830 753 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 P4HA2O15460 535 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
SGMS1-211ENST00000626236 HLA-DRAP01903 254 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 MYOGP15173 224 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 LRPAP1P30533 357 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 RPL9P32969 192 aaKnown RBP9.17□□□□□ -0.94
SGMS1-211ENST00000626236 PBX3P40426 434 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 SLC11A1P49279 550 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 BCAR1P56945 870 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 UBASH3AP57075 661 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 MYL6P60660 151 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 RBP5P82980 135 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 UBXN1Q04323 297 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 NCOA4Q13772 614 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 UPP1Q16831 310 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 FBXL13Q8NEE6 735 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 HASPINQ8TF76 798 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 ELMO3Q96BJ8 720 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF560Q96MR9 790 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 TMEM175Q9BSA9 504 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 CRACR2AQ9BSW2 395 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 GCNT4Q9P109 453 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
SGMS1-211ENST00000626236 PDE4DIPQ5VU43 2346 aa9.17□□□□□ -0.94
SGMS1-211ENST00000626236 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 LINC01553A4QN01 128 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 NT5C1B-RDH14C9J2C7 533 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 F8W810 466 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 NRP1O14786 923 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PMM2O15305 246 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 TEX33O43247 280 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 AP5Z1O43299 807 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 CBFA2T2O43439 604 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 LRRN2O75325 713 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 B3GAT3O94766 335 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 KIF4AO95239 1232 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 ALDH2P05091 517 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 CA3P07451 260 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 GALTP07902 379 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 LAG3P18627 525 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PBX2P40425 430 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PNPLA4P41247 253 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 ALDH7A1P49419 539 aaKnown RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 TAF6P49848 677 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms