RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 COLGALT2Q8IYK4 626 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 YME1L1Q96TA2 773 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 INTS2Q9H0H0 1204 aaKnown RBP17.9■□□□□ 0.46
CCNA1-203ENST00000625767 XYLT2Q9H1B5 865 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 CWH43Q9H720 699 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 APOBEC3GQ9HC16 384 aaKnown RBP17.9■□□□□ 0.46
CCNA1-203ENST00000625767 SIX2Q9NPC8 291 aa17.9■□□□□ 0.46
CCNA1-203ENST00000625767 AJAP1Q9UKB5 411 aaPredicted RBP17.9■□□□□ 0.46
CCNA1-203ENST00000625767 SZT2Q5T011 3432 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 NT5C1B-RDH14C9J2C7 533 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 SPTLC1O15269 473 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 CYP3A5P20815 502 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 AP3M2P53677 418 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 UPP1Q16831 310 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 FKBP15Q5T1M5 1219 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 GBP6Q6ZN66 633 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 SPRED2Q7Z698 418 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 TATDN2Q93075 761 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 SLC9A7Q96T83 725 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 LSM14BQ9BX40 385 aaKnown RBP17.89■□□□□ 0.45
CCNA1-203ENST00000625767 ITGA11Q9UKX5 1188 aa17.89■□□□□ 0.45
CCNA1-203ENST00000625767 MRPL42Q9Y6G3 142 aaKnown RBP17.89■□□□□ 0.45
CCNA1-203ENST00000625767 PODXLO00592 558 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 PIRO00625 290 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 N4BP1O75113 896 aaKnown RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 ARHGEF15O94989 841 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 LRPAP1P30533 357 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 OR1G1P47890 313 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 MRE11P49959 708 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 HTRA4P83105 476 aaPredicted RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 BTG3Q14201 252 aaPredicted RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 TRIM65Q6PJ69 517 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 CD300LGQ6UXG3 332 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 TMEM173Q86WV6 379 aaPredicted RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 ARHGEF19Q8IW93 802 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 EHBP1Q8NDI1 1231 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 KAT5Q92993 513 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 ERGIC2Q96RQ1 377 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 FAM207AQ9NSI2 230 aaPredicted RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 SLC38A7Q9NVC3 462 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
CCNA1-203ENST00000625767 NUB1Q9Y5A7 615 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 VWA8A3KMH1 1905 aa17.88■□□□□ 0.45
CCNA1-203ENST00000625767 I3L4J1 428 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 PMM2O15305 246 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 P4HA2O15460 535 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 XPOTO43592 962 aaKnown RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 NOL4O94818 638 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 CLSTN1O94985 981 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 KIF4AO95239 1232 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 SLC11A1P49279 550 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 TRPC3Q13507 836 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 PHLDB3Q6NSJ2 640 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 BCL7CQ8WUZ0 217 aaPredicted RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 KANSL3Q9P2N6 904 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 POLIQ9UNA4 740 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 TSC2P49815 1807 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 GTPBP10A4D1E9 387 aaKnown RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 NRP1O14786 923 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 CBFA2T2O43439 604 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 TLL1O43897 1013 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 LINC00271P0C7V0 271 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 RBP5P82980 135 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 ZNF699Q32M78 642 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 SCARA5Q6ZMJ2 495 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 PHOSPHO2Q8TCD6 241 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 HPDLQ96IR7 371 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 FAM193BQ96PV7 902 aaPredicted RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 TSPAN18Q96SJ8 248 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 ARID3AQ99856 593 aa17.87■□□□□ 0.45
CCNA1-203ENST00000625767 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 MTIF3Q9H2K0 278 aaKnown RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
CCNA1-203ENST00000625767 TRANK1O15050 2925 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 PBX2P40425 430 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 BRCC3P46736 316 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 BCAR1P56945 870 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 NOP14P78316 857 aaKnown RBP17.86■□□□□ 0.45
CCNA1-203ENST00000625767 MLLT1Q03111 559 aaPredicted RBP17.86■□□□□ 0.45
CCNA1-203ENST00000625767 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 RRAGAQ7L523 313 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 GPIHBP1Q8IV16 184 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 CMTR2Q8IYT2 770 aaKnown RBP17.86■□□□□ 0.45
CCNA1-203ENST00000625767 PCMTD1Q96MG8 357 aaPredicted RBP17.86■□□□□ 0.45
CCNA1-203ENST00000625767 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 MARCH5Q9NX47 278 aa17.86■□□□□ 0.45
CCNA1-203ENST00000625767 RNF225M0QZC1 329 aaPredicted RBP17.85■□□□□ 0.45
CCNA1-203ENST00000625767 B3GAT3O94766 335 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 GALTP07902 379 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 LILRA4P59901 499 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 WDR72Q3MJ13 1102 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 SPOUT1Q5T280 376 aaKnown RBP17.85■□□□□ 0.45
CCNA1-203ENST00000625767 VSTM4Q8IW00 320 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 MRFAP1L1Q96HT8 127 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 RAD9AQ99638 391 aa17.85■□□□□ 0.45
CCNA1-203ENST00000625767 GANQ9H2C0 597 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms