RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 RPS9P46781 194 aaKnown RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 SMTNP53814 917 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 ADCY1Q08828 1119 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 RAD51AP2Q09MP3 1159 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 MRPL58Q14197 206 aaKnown RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 GRM2Q14416 872 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 IL17AQ16552 155 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 FAM78AQ5JUQ0 283 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 CLDN23Q96B33 292 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 ZBTB45Q96K62 511 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 TBC1D32Q96NH3 1257 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 BRD9Q9H8M2 597 aa15.8■□□□□ 0.12
TUBB3-215ENST00000625617 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 AFF4Q9UHB7 1163 aaKnown RBP15.8■□□□□ 0.12
TUBB3-215ENST00000625617 CLDN3O15551 220 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 CXCL8P10145 99 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 MAPTP10636 758 aaKnown RBP15.79■□□□□ 0.12
TUBB3-215ENST00000625617 CCR2P41597 374 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 MATR3P43243 847 aaKnown RBP eCLIP15.79■□□□□ 0.12
TUBB3-215ENST00000625617 MCL1Q07820 350 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 TWF1Q12792 350 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 SLC10A6Q3KNW5 377 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 POTEHQ6S545 545 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 DGLUCYQ7Z3D6 616 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 LEMD2Q8NC56 503 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 ATRIPQ8WXE1 791 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 DDX12PQ92771 950 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 BICD1Q96G01 975 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 BORCS6Q96GS4 357 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 CDK5RAP3Q96JB5 506 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 ASB16Q96NS5 453 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
TUBB3-215ENST00000625617 TRMT61BQ9BVS5 477 aaKnown RBP15.79■□□□□ 0.12
TUBB3-215ENST00000625617 ASAH2Q9NR71 780 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 NCDNQ9UBB6 729 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 MAFFQ9ULX9 164 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 PCDHB8Q9UN66 801 aa15.79■□□□□ 0.12
TUBB3-215ENST00000625617 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-215ENST00000625617 DOCK6Q96HP0 2047 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 GPR179Q6PRD1 2367 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 OTOGLQ3ZCN5 2332 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 ATP2C1P98194 919 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 PUM1Q14671 1186 aaKnown RBP eCLIP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 RILPL1Q5EBL4 403 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 HYIQ5T013 277 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 MCTP1Q6DN14 999 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 KCTD17Q8N5Z5 321 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 SMARCD2Q92925 531 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 IRF7Q92985 503 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 ZNF512Q96ME7 567 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 PRMT8Q9NR22 394 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 ZSCAN32Q9NX65 697 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 NDRG2Q9UN36 371 aaKnown RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 SMG5Q9UPR3 1016 aaKnown RBP15.78■□□□□ 0.12
TUBB3-215ENST00000625617 YIPF1Q9Y548 306 aa15.78■□□□□ 0.12
TUBB3-215ENST00000625617 DCHS1Q96JQ0 3298 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 H0YCG3 227 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 MAN2B1O00754 1011 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 CLTAP09496 248 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 MYL4P12829 197 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 PSMC3P17980 439 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 EPHA5P54756 1037 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 VITQ6UXI7 678 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 HS6ST3Q8IZP7 471 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 SYT2Q8N9I0 419 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-215ENST00000625617 ZBTB44Q8NCP5 570 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 DEPDC1BQ8WUY9 529 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
TUBB3-215ENST00000625617 KIF12Q96FN5 646 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 KIF2CQ99661 725 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 SLITRK6Q9H5Y7 841 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 PLEKHA5Q9HAU0 1116 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 CEP72Q9P209 647 aa15.77■□□□□ 0.12
TUBB3-215ENST00000625617 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
TUBB3-215ENST00000625617 CACNA1AO00555 2505 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 VWA3AA6NCI4 1184 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 SHISA7A6NL88 538 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 NRG2O14511 850 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-215ENST00000625617 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 LRPAP1P30533 357 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 GDI1P31150 447 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 SLC12A3P55017 1021 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 SPAG1Q07617 926 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 MTAPQ13126 283 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 PLD1Q13393 1074 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 TSSK4Q6SA08 328 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 RNF19BQ6ZMZ0 732 aa15.76■□□□□ 0.11
TUBB3-215ENST00000625617 USP37Q86T82 979 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms