RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SLC12A5Q9H2X9 1139 aa4.16□□□□□ -1.74
CDKL5-208ENST00000624953 PCDH12Q9NPG4 1184 aa4.16□□□□□ -1.74
CDKL5-208ENST00000624953 C14orf119Q9NWQ9 140 aa4.16□□□□□ -1.74
CDKL5-208ENST00000624953 ING3Q9NXR8 418 aa4.16□□□□□ -1.74
CDKL5-208ENST00000624953 MCM8Q9UJA3 840 aa4.16□□□□□ -1.74
CDKL5-208ENST00000624953 RTL1A6NKG5 1358 aa4.15□□□□□ -1.74
CDKL5-208ENST00000624953 ATRNL1Q5VV63 1379 aa4.15□□□□□ -1.74
CDKL5-208ENST00000624953 PLEKHG2Q9H7P9 1386 aa4.15□□□□□ -1.74
CDKL5-208ENST00000624953 UBE2QL1A1L167 161 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 MMP10P09238 476 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 DPEP1P16444 411 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 CDK11BP21127 795 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 ACO1P21399 889 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 ACRV1P26436 265 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 CANXP27824 592 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 LGALS4P56470 323 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 MRPL49Q13405 166 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 RRS1Q15050 365 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 UBE3CQ15386 1083 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 CT47A1Q5JQC4 288 aaPredicted RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 FAM111BQ6SJ93 734 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 DOK3Q7L591 496 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 PIGBQ92521 554 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 AHCYL2Q96HN2 611 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 CDK5RAP1Q96SZ6 601 aaKnown RBP4.15□□□□□ -1.75
CDKL5-208ENST00000624953 CEP72Q9P209 647 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 FAM184BQ9ULE4 1060 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 TCAF1Q9Y4C2 921 aa4.15□□□□□ -1.75
CDKL5-208ENST00000624953 MKI67P46013 3256 aaKnown RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 KLRG2A4D1S0 409 aaPredicted RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 WNT10BO00744 389 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 GABRDO14764 452 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 NRP1O14786 923 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 MUSKO15146 869 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 FOXN1O15353 648 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 GASTP01350 101 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 RBP3P10745 1247 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 GYS1P13807 737 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 AGXTP21549 392 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 NRG3P56975 720 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 MGAT5Q09328 741 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 FSTL1Q12841 308 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 MTMR1Q13613 665 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 DCAF17Q5H9S7 520 aaPredicted RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 MIIPQ5JXC2 388 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 IQSEC1Q6DN90 963 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 CRIP3Q6Q6R5 217 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 BTNL9Q6UXG8 535 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 APBB1IPQ7Z5R6 666 aaPredicted RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 CNTD1Q8N815 330 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 IL17DQ8TAD2 202 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 CACTINQ8WUQ7 758 aaKnown RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 AUTS2Q8WXX7 1259 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF503Q96F45 646 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 RPL10LQ96L21 214 aaKnown RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 UIMC1Q96RL1 719 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 LSM14BQ9BX40 385 aaKnown RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 KCNH6Q9H252 994 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 SLC5A4Q9NY91 659 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 TRPS1Q9UHF7 1281 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 KCNG1Q9UIX4 513 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 ASAP1Q9ULH1 1129 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 USP18Q9UMW8 372 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 COL4A3BPQ9Y5P4 624 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 AKAP11Q9UKA4 1901 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 PCDH11XQ9BZA7 1347 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 PCDH11YQ9BZA8 1340 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 LAMB2P55268 1798 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 NUP98P52948 1817 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 ROCK2O75116 1388 aaKnown RBP4.14□□□□□ -1.75
CDKL5-208ENST00000624953 CARMIL3Q8ND23 1372 aa4.14□□□□□ -1.75
CDKL5-208ENST00000624953 TAF1P21675 1872 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 CENPFP49454 3210 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 DAPK3O43293 454 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 HOXA3O43365 443 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA12O60330 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 RAB11FIP3O75154 756 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 STC2O76061 302 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 MTHFD2P13995 350 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 CNGA1P29973 690 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 CHRNA5P30532 468 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 MCAMP43121 646 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 TGFB2P61812 414 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 DDR1Q08345 913 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 MGAT2Q10469 447 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PRKD1Q15139 912 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 HSP90AB2PQ58FF8 381 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 SPDYAQ5MJ70 313 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 GJC2Q5T442 439 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 SYDE2Q5VT97 1194 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 MFSD5Q6N075 450 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF585AQ6P3V2 769 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 RNF207Q6ZRF8 634 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 Q6ZVL8 140 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 Q8N1X5 172 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 GLB1L3Q8NCI6 653 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 C1orf162Q8NEQ5 155 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 OR52N2Q8NGI0 321 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 FAM89AQ96GI7 184 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms