RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 LMBRD2Q68DH5 695 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 CD300LGQ6UXG3 332 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 TAF4BQ92750 862 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 PAAF1Q9BRP4 392 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 NKX2-4Q9H2Z4 354 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 NDST4Q9H3R1 872 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 PUF60Q9UHX1 559 aaKnown RBP13.44□□□□□ -0.26
LINC00963-216ENST00000623185 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
LINC00963-216ENST00000623185 NT5C1B-RDH14C9J2C7 533 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 TPM2P07951 284 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 KRT19P08727 400 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 GUCY2FP51841 1108 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 UBE3AQ05086 875 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 ELAVL2Q12926 359 aaKnown RBP13.43□□□□□ -0.26
LINC00963-216ENST00000623185 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 HSP90AA4PQ58FG1 418 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 MIIPQ5JXC2 388 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 DDX53Q86TM3 631 aaKnown RBP13.43□□□□□ -0.26
LINC00963-216ENST00000623185 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 FBXL13Q8NEE6 735 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 RAB20Q9NX57 234 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 ADAM28Q9UKQ2 775 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
LINC00963-216ENST00000623185 GTPBP10A4D1E9 387 aaKnown RBP13.42□□□□□ -0.26
LINC00963-216ENST00000623185 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 H3BNC9 293 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 FGF18O76093 207 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 VNN1O95497 513 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 POLR2BP30876 1174 aaKnown RBP13.42□□□□□ -0.26
LINC00963-216ENST00000623185 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■■■ 52.5
LINC00963-216ENST00000623185 TAF6P49848 677 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 MXI1P50539 228 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 BIRC3Q13489 604 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 NCOA4Q13772 614 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 KRT31Q15323 416 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 CBWD6Q4V339 395 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 CBWD3Q5JTY5 395 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 CBWD5Q5RIA9 395 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 SCARA3Q6AZY7 606 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 APTXQ7Z2E3 356 aaKnown RBP13.42□□□□□ -0.26
LINC00963-216ENST00000623185 GAS2L3Q86XJ1 694 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 C17orf80Q9BSJ5 609 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 C11orf84Q9BUA3 381 aaPredicted RBP13.42□□□□□ -0.26
LINC00963-216ENST00000623185 ZNF576Q9H609 170 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 MARCH5Q9NX47 278 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 GDAP2Q9NXN4 497 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 PRG3Q9Y2Y8 225 aaPredicted RBP13.42□□□□□ -0.26
LINC00963-216ENST00000623185 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
LINC00963-216ENST00000623185 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 M0QZQ0 153 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 KIF4AO95239 1232 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 HLA-DRAP01903 254 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 IGFBP6P24592 240 aaPredicted RBP13.41□□□□□ -0.26
LINC00963-216ENST00000623185 CTNNB1P35222 781 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 PBX3P40426 434 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 MYL6P60660 151 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 SV2CQ496J9 727 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 TIGD5Q53EQ6 642 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
LINC00963-216ENST00000623185 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 RABGGTAQ92696 567 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 GPR62Q9BZJ7 368 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 XYLT2Q9H1B5 865 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 CHST7Q9NS84 486 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
LINC00963-216ENST00000623185 FNDC1Q4ZHG4 1894 aaPredicted RBP13.41□□□□□ -0.26
LINC00963-216ENST00000623185 CEP290O15078 2479 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 PPEF2O14830 753 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SYN3O14994 580 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SPTLC1O15269 473 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 ASS1P00966 412 aaKnown RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 ITGB1P05556 798 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms