RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 DRG2P55039 364 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 BTKQ06187 659 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 MOGSQ13724 837 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 COL19A1Q14993 1142 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 UBAP2Q5T6F2 1119 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 EPM2AIP1Q7L775 607 aaPredicted RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD13BQ86YJ7 626 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 JDP2Q8WYK2 163 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 STARD8Q92502 1023 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 LY9Q9HBG7 655 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 SCINQ9Y6U3 715 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 PFASO15067 1338 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 FUOMA2VDF0 154 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ADAM23O75077 832 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ENDOUP21128 410 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 PCYT1AP49585 367 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 NOP14P78316 857 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 ATP2C1P98194 919 aaPredicted RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 TAF1CQ15572 869 aaPredicted RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 ASIC2Q16515 512 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 EXOC3L4Q17RC7 722 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 SGMS1Q86VZ5 419 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 LRRC6Q86X45 466 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ZFP28Q8NHY6 868 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 IGDCC4Q8TDY8 1250 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 NACC2Q96BF6 587 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 ZFRQ96KR1 1074 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 MAK16Q9BXY0 300 aaKnown RBP8.36□□□□□ -1.07
VPS11-209ENST00000622309 SLCO1B3Q9NPD5 702 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 AMFRQ9UKV5 643 aa8.36□□□□□ -1.07
VPS11-209ENST00000622309 PARP4Q9UKK3 1724 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 PHF2O75151 1096 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 USP1O94782 785 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 MCM7P33993 719 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 GRM1Q13255 1194 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TNIP1Q15025 636 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 FAM83BQ5T0W9 1011 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 UNC5DQ6UXZ4 953 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TRMT10CQ7L0Y3 403 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 KSR1Q8IVT5 923 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SAMD14Q8IZD0 417 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 SIX5Q8N196 739 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C10orf82Q8WW14 230 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SYN2Q92777 582 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 ANKRD36BP1Q96IX9 119 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PLIN2Q99541 437 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CEP72Q9P209 647 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 AK5Q9Y6K8 562 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C4AP0C0L4 1744 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C4BP0C0L5 1744 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SCN11AQ9UI33 1791 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 hCG_1642624A0A1W2PR95 340 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 FAM47DPA6NHR8 397 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 F8W8V4 182 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 GPAA1O43292 621 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PCNAP12004 261 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 RFX1P22670 979 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 BCAP31P51572 246 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CALCOCO2Q13137 446 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 MAPK7Q13164 816 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 SPARCL1Q14515 664 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 CTC1Q2NKJ3 1217 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C11orf74Q86VG3 221 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PDSS2Q86YH6 399 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PYROXD1Q8WU10 500 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 KLHL4Q9C0H6 718 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 MRPL46Q9H2W6 279 aaKnown RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 NPHS2Q9NP85 383 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 HPS4Q9NQG7 708 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 ARL8BQ9NVJ2 186 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 UVRAGQ9P2Y5 699 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 RABGAP1Q9Y3P9 1069 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TTLL3Q9Y4R7 772 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 PODXLO00592 558 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 C2CD2LO14523 706 aa8.35□□□□□ -1.07
VPS11-209ENST00000622309 FOXD2O60548 495 aaPredicted RBP8.35□□□□□ -1.07
VPS11-209ENST00000622309 APOEP02649 317 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms