RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GTF2A1P52655 376 aaPredicted RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 BACE1P56817 501 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 TAS2R40P59535 323 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 STRN3Q13033 797 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 SNX1Q13596 522 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CUL2Q13617 745 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 EMC2Q15006 297 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC25Q86WR0 208 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC50Q8IVM0 306 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 SCYL3Q8IZE3 742 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 ANKS4BQ8N8V4 417 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 UHMK1Q8TAS1 419 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 FEZF2Q8TBJ5 459 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 MAGEC3Q8TD91 643 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CPA5Q8WXQ8 436 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 FAM212AQ96EL1 285 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 WNK4Q96J92 1243 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 SCLT1Q96NL6 688 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 FNBP1Q96RU3 617 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 DDX23Q9BUQ8 820 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 PORCNQ9H237 461 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 DHX33Q9H6R0 707 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 TMEM134Q9H6X4 195 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 APOBEC3GQ9HC16 384 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 R3HDM2Q9Y2K5 976 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 ACTL7BQ9Y614 415 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 A0A0B4J269 797 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 C19orf81C9J6K1 198 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CHUKO15111 745 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 TNNI1P19237 187 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATP4AP20648 1035 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 GLRA2P23416 452 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 KLRC2P26717 231 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 PTPN7P35236 360 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CETN2P41208 172 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 SLCO1A2P46721 670 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF132P52740 706 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 AP3M2P53677 418 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 WNT7BP56706 349 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 NLRP11P59045 1033 aaKnown RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 LMNB2Q03252 620 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 GRM1Q13255 1194 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 MAMLD1Q13495 774 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 STAT4Q14765 748 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 LONRF1Q17RB8 773 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC142Q17RM4 750 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 GNPTABQ3T906 1256 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 MTERF2Q49AM1 385 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 LRRC38Q5VT99 294 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 SNRNP48Q6IEG0 339 aaKnown RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 HIBCHQ6NVY1 386 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 DRICH1Q6PGQ1 229 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 RCOR2Q8IZ40 523 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 RIBC1Q8N443 379 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC89Q8N998 374 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 RBBP8NLQ8NC74 664 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ASAP3Q8TDY4 903 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CKAP2Q8WWK9 683 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATG4AQ8WYN0 398 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ARHGEF2Q92974 986 aaKnown RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ELMO3Q96BJ8 720 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 PRMT1Q99873 361 aaKnown RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 OSBPL8Q9BZF1 889 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 HAPLN2Q9GZV7 340 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ACAD9Q9H845 621 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CYP39A1Q9NYL5 469 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ADAM22Q9P0K1 906 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 SAMD15Q9P1V8 674 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 IP6K2Q9UHH9 426 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF214Q9UL59 606 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 DRG1Q9Y295 367 aaKnown RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 TELO2Q9Y4R8 837 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 PCDHB4Q9Y5E5 795 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 PTPRJQ12913 1337 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 ADGRA2Q96PE1 1338 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 CNTNAP2Q9UHC6 1331 aa10.22□□□□□ -0.77
IGHV3-54-201ENST00000622166 IGKV6D-21A0A0A0MT36 114 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 TCRBV5S1A1TA0A578 114 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 VGLL3A8MV65 326 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 NDC80O14777 642 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 SNX3O60493 162 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 OATP04181 439 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 RALAP11233 206 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 PTPRAP18433 802 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 GNA15P30679 374 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 ADCY8P40145 1251 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 RFC5P40937 340 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 POLGP54098 1239 aaPredicted RBP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 COPS2P61201 443 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 PPARDQ03181 441 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 MCL1Q07820 350 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms