RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 PALB2Q86YC2 1186 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 C1orf54Q8WWF1 131 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 CEP95Q96GE4 821 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 FNBP1Q96RU3 617 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 VPS11Q9H270 941 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
TDRD3-209ENST00000621840 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
TDRD3-209ENST00000621840 NIP7Q9Y221 180 aaKnown RBP eCLIP8.32□□□□□ -1.08
TDRD3-209ENST00000621840 ATF5Q9Y2D1 282 aaPredicted RBP8.32□□□□□ -1.08
TDRD3-209ENST00000621840 FOXO6A8MYZ6 492 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 EML1O00423 815 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TGFB1I1O43294 461 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TOM1O60784 492 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CPA3P15088 417 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 GCAP28676 217 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 PRDX5P30044 214 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 HIBADHP31937 336 aaKnown RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 RPA3P35244 121 aaPredicted RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 RFC4P35249 363 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ARFIP2P53365 341 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ZBTB16Q05516 673 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CDK18Q07002 472 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ASPHQ12797 758 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CDC16Q13042 620 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 THOC5Q13769 683 aaKnown RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 SLC1A5Q15758 541 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CLEC16AQ2KHT3 1053 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CENPUQ71F23 418 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CHSY1Q86X52 802 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 SCYL3Q8IZE3 742 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 C17orf75Q9HAS0 396 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 PRDM11Q9NQV5 511 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 DMAC2Q9NW81 257 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 KANSL3Q9P2N6 904 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 HEY2Q9UBP5 337 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 GRID1Q9ULK0 1009 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 AP1G1O43747 822 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 STRNO43815 780 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 LRRN2O75325 713 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 LDHCP07864 332 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 USP46P62068 366 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 IRX4P78413 519 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 CCNG2Q16589 344 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ARHGAP44Q17R89 818 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ZC2HC1CQ53FD0 456 aaPredicted RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 MAP3K21Q5TCX8 1036 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TBC1D9BQ66K14 1250 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 LVRNQ6Q4G3 990 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 KYAT3Q6YP21 454 aaKnown RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TMPRSS6Q8IU80 811 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 DTX3LQ8TDB6 740 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 COA7Q96BR5 231 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 ZNF653Q96CK0 615 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 FAM81BQ96LP2 452 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 RBM15Q96T37 977 aaKnown RBP eCLIP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
TDRD3-209ENST00000621840 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 TAS2R1Q9NYW7 299 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 MINPP1Q9UNW1 487 aa8.31□□□□□ -1.08
TDRD3-209ENST00000621840 LOXHD1Q8IVV2 1947 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CFAP69A5D8W1 941 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CLIC2O15247 247 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CAMTA2O94983 1202 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 PLS3P13797 630 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 RRM1P23921 792 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CDK8P49336 464 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 NEK3P51956 506 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 ACTR3P61158 418 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 HPCAP84074 193 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 DLGAP5Q15398 846 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 PKN2Q16513 984 aaKnown RBP8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CCDC142Q17RM4 750 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CBWD6Q4V339 395 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 EFHC2Q5JST6 749 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CBWD3Q5JTY5 395 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 CBWD5Q5RIA9 395 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 RINLQ6ZS11 566 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 RNF168Q8IYW5 571 aaPredicted RBP8.3□□□□□ -1.08
TDRD3-209ENST00000621840 WDR60Q8WVS4 1066 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 GJA10Q969M2 543 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
TDRD3-209ENST00000621840 C9orf72Q96LT7 481 aa8.3□□□□□ -1.08
TDRD3-209ENST00000621840 POLR3CQ9BUI4 534 aaPredicted RBP8.3□□□□□ -1.08
TDRD3-209ENST00000621840 RUSC1Q9BVN2 902 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms