RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 TSPAN18Q96SJ8 248 aa31.5■■■□□ 2.63
SEMA3B-215ENST00000621029 LRRC27Q9C0I9 530 aa31.5■■■□□ 2.63
SEMA3B-215ENST00000621029 KCNK12Q9HB15 430 aa31.5■■■□□ 2.63
SEMA3B-215ENST00000621029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.5■■■□□ 2.636e-9■■■■□ 22.1
SEMA3B-215ENST00000621029 PCDHB13Q9Y5F0 798 aa31.5■■■□□ 2.63
SEMA3B-215ENST00000621029 PAPLNO95428 1278 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 LRPAP1P30533 357 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 ROR1Q01973 937 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 POSTNQ15063 836 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 UVSSAQ2YD98 709 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 SLC8B1Q6J4K2 584 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 DSTYKQ6XUX3 929 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 CCDC65Q8IXS2 484 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 FBXL6Q8N531 539 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 FBXL5Q9UKA1 691 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 PCDHB8Q9UN66 801 aa31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 ARIH1Q9Y4X5 557 aaPredicted RBP31.49■■■□□ 2.63
SEMA3B-215ENST00000621029 PRRG1O14668 218 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 HOXA9P31269 272 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 ME1P48163 572 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 NTHL1P78549 312 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 TDGQ13569 410 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 TMEM132DQ14C87 1099 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 L1TD1Q5T7N2 865 aaKnown RBP31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 ZNF280DQ6N043 979 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 ZNF461Q8TAF7 563 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 KCNG4Q8TDN1 519 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 OLFML3Q9NRN5 406 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 IGSF9Q9P2J2 1179 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 DENND4AQ7Z401 1863 aa31.48■■■□□ 2.63
SEMA3B-215ENST00000621029 KCNA1Q09470 495 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 PKP1Q13835 747 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 SPATA1Q5VX52 437 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 IQUBQ8NA54 791 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 TNMDQ9H2S6 317 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 EPS15L1Q9UBC2 864 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 TIMM13Q9Y5L4 95 aaPredicted RBP31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 STYXL1Q9Y6J8 313 aa31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 MTCL1Q9Y4B5 1905 aaKnown RBP31.47■■■□□ 2.63
SEMA3B-215ENST00000621029 PPP1R37O75864 691 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 ADRB2P07550 413 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 NFICP08651 508 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 PLA2G5P39877 138 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 ALCAMQ13740 583 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 SHC4Q6S5L8 630 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 USP37Q86T82 979 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 CUEDC2Q9H467 287 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 CYP4F11Q9HBI6 524 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 CFAP45Q9UL16 551 aa31.46■■■□□ 2.63
SEMA3B-215ENST00000621029 WDR27A2RRH5 827 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 LRG1P02750 347 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 CASP5P51878 434 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 AMPD3Q01432 767 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 YWHAHQ04917 246 aaPredicted RBP31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 MRPL58Q14197 206 aaKnown RBP31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 NOC3LQ8WTT2 800 aaKnown RBP31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 RSAD2Q8WXG1 361 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 STRA6Q9BX79 667 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 ASB7Q9H672 318 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 DERAQ9Y315 318 aa31.45■■■□□ 2.63
SEMA3B-215ENST00000621029 PDGFBP01127 241 aaPredicted RBP31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 LAMP2P13473 410 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 CPB1P15086 417 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 ADSSP30520 456 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 E2F4Q16254 413 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 ATL3Q6DD88 541 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 RTL10Q7L3V2 364 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 FAM213AQ9BRX8 229 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 MFSD1Q9H3U5 465 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 HCFC1R1Q9NWW0 138 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 FAM13BQ9NYF5 915 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 MYO10Q9HD67 2058 aa31.44■■■□□ 2.62
SEMA3B-215ENST00000621029 FRMD3A2A2Y4 597 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 M0QZQ0 153 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 PPEF2O14830 753 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 TBC1D4O60343 1298 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 ABLIM3O94929 683 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 ASIC1P78348 528 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 DNM1Q05193 864 aaKnown RBP31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 STXBP4Q6ZWJ1 553 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 FGFBP2Q9BYJ0 223 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 FBXL21Q9UKT6 434 aa31.43■■■□□ 2.62
SEMA3B-215ENST00000621029 PRPF6O94906 941 aaKnown RBP31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 ATF2P15336 505 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 PABPC1LQ4VXU2 614 aaKnown RBP31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 C9orf57Q5W0N0 161 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 TPGS2Q68CL5 300 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 ST13P5Q8NFI4 369 aaPredicted RBP31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 SAAL1Q96ER3 474 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 TMEM206Q9H813 350 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 KBTBD4Q9NVX7 518 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 PCDHA7Q9UN72 937 aa31.42■■■□□ 2.62
SEMA3B-215ENST00000621029 POLR2DO15514 142 aaKnown RBP31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 TRIM9Q9C026 710 aa31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 KCNH6Q9H252 994 aa31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 DNMT3BQ9UBC3 853 aaKnown RBP31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 CDH7Q9ULB5 785 aa31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 C2CD2Q9Y426 696 aa31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 ZFP37Q9Y6Q3 630 aaPredicted RBP31.41■■■□□ 2.62
SEMA3B-215ENST00000621029 MYH15Q9Y2K3 1946 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms