RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IARS2Q9NSE4 1012 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CNOT7Q9UIV1 285 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 KCNA2P16389 499 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ITIH2P19823 946 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 COPB2P35606 906 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 EIF2B2P49770 351 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 DYNLT1P63172 113 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ROR1Q01973 937 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 UBE3AQ05086 875 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 MTFR1Q15390 333 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 TRIQKQ629K1 86 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 LRRC31Q6UY01 552 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CCNYL1Q8N7R7 359 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 VPS33BQ9H267 617 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 LSM1O15116 133 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SEC24DO94855 1032 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CLPTM1O96005 669 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RBBP7Q16576 425 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SFR1Q86XK3 245 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC17Q96LX7 622 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF341Q9BYN7 854 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 DTNAQ9Y4J8 743 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RNF123Q5XPI4 1314 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 TEX28O15482 410 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 MAGEA10P43363 369 aaPredicted RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 COG2Q14746 738 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 HEATR6Q6AI08 1181 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 PDCD6IPQ8WUM4 868 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ASZ1Q8WWH4 475 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SEC31BQ9NQW1 1179 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 RSL24D1Q9UHA3 163 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 FAM153AQ9UHL3 310 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SPATA31A1Q5TZJ5 1347 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SALL3Q9BXA9 1300 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SLC26A4O43511 780 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 AP3M2P53677 418 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 KYAT1Q16773 422 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 FAM47AQ5JRC9 791 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 DDIASQ8IXT1 998 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ENKURQ8TC29 256 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 BTN2A2Q8WVV5 523 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 C1orf50Q9BV19 199 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 KLHL4Q9C0H6 718 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 SLC40A1Q9NP59 571 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 EXOSC4Q9NPD3 245 aaKnown RBP7.51□□□□□ -1.21
COLCA1-205ENST00000620864 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 ERBB3P21860 1342 aa7.51□□□□□ -1.21
COLCA1-205ENST00000620864 KITP10721 976 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 P3H1Q32P28 736 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 POP5Q969H6 163 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 AMNQ9BXJ7 453 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 FKBP14Q9NWM8 211 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SNX24Q9Y343 169 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SMIM31A0A1B0GVY4 71 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 A8MXQ7 604 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 EVPLLA8MZ36 301 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ENO1P06733 434 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 S100A1P23297 94 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 HNRNPH1P31943 449 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 LSP1P33241 339 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TAF2Q6P1X5 1199 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SZRD1Q7Z422 152 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 LINC00301Q8NCQ3 95 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PNMA1Q8ND90 353 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ASAP3Q8TDY4 903 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SLC16A10Q8TF71 515 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 FAM162AQ96A26 154 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 XPO6Q96QU8 1125 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 UBXN6Q9BZV1 441 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 FHDC1Q9C0D6 1143 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 STAP1Q9ULZ2 295 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 INO80B-WBP1J3KQ70 363 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CNOT3O75175 753 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ECDO95905 644 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 RAB25P57735 213 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 COX10Q12887 443 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 NAIF1Q69YI7 327 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TSPYL6Q8N831 410 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ATL2Q8NHH9 583 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SNRNP27Q8WVK2 155 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PRMT1Q99873 361 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 INO80BQ9C086 356 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 GREM2Q9H772 168 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 KLRF2D3W0D1 207 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 H7C1W4 665 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CYTH3O43739 400 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 BCL10O95999 233 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 IL6P05231 212 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PDIA3P30101 505 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 COPAP53621 1224 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 EIF4A1P60842 406 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PRAMEP78395 509 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TNFAIP2Q03169 654 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SNX17Q15036 470 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms