RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 GSDMAQ96QA5 445 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 KBTBD4Q9NVX7 518 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 IGSF9Q9P2J2 1179 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 ARHGAP28Q9P2N2 729 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 MYH11P35749 1972 aa17.54■□□□□ 0.4
CD40-207ENST00000620709 C8AP07357 584 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 MCF2P10911 925 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 GUCY2CP25092 1073 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 TKTP29401 623 aaKnown RBP17.53■□□□□ 0.4
CD40-207ENST00000620709 OR1D2P34982 312 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 BRCC3P46736 316 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 SMTNP53814 917 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 AMPD3Q01432 767 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 SEZ6Q53EL9 994 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 MPZL3Q6UWV2 235 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 GRASPQ7Z6J2 395 aaPredicted RBP17.53■□□□□ 0.4
CD40-207ENST00000620709 TMEM105Q8N8V8 129 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
CD40-207ENST00000620709 ATOH1Q92858 354 aaPredicted RBP17.53■□□□□ 0.4
CD40-207ENST00000620709 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 VWA8A3KMH1 1905 aa17.53■□□□□ 0.4
CD40-207ENST00000620709 H0Y858 1186 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 TRAPPC3O43617 180 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 CFHP08603 1231 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 PLS3P13797 630 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 RFX1P22670 979 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 FSHRP23945 695 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 NTHL1P78549 312 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 UPP1Q16831 310 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 ASTLQ6HA08 431 aaPredicted RBP17.52■□□□□ 0.4
CD40-207ENST00000620709 SIX5Q8N196 739 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 LRRC15Q8TF66 581 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
CD40-207ENST00000620709 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
CD40-207ENST00000620709 BICD1Q96G01 975 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 PTPRHQ9HD43 1115 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 DUSP12Q9UNI6 340 aa17.52■□□□□ 0.4
CD40-207ENST00000620709 PODXLO00592 558 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 C1RP00736 705 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 FGFR3P22607 806 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SLC12A3P55017 1021 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 ARPP19P56211 112 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SOX4Q06945 474 aaPredicted RBP17.52■□□□□ 0.39
CD40-207ENST00000620709 MORC3Q14149 939 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SV2BQ7L1I2 683 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 C3orf58Q8NDZ4 430 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SLC7A14Q8TBB6 771 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 RAD54LQ92698 747 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SNX27Q96L92 541 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 LRRC27Q9C0I9 530 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 SLC38A7Q9NVC3 462 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 RMND1Q9NWS8 449 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 DACH1Q9UI36 760 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.39
CD40-207ENST00000620709 TMEM189-UBE2V1I3L0A0 370 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 CASP1P29466 404 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 CUL4BQ13620 913 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 KCTD17Q8N5Z5 321 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 SPIRE2Q8WWL2 714 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 C18orf25Q96B23 403 aaPredicted RBP17.51■□□□□ 0.39
CD40-207ENST00000620709 DDX27Q96GQ7 796 aaKnown RBP17.51■□□□□ 0.39
CD40-207ENST00000620709 ZMAT2Q96NC0 199 aaKnown RBP17.51■□□□□ 0.39
CD40-207ENST00000620709 BPIFA3Q9BQP9 254 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.51■□□□□ 0.39
CD40-207ENST00000620709 EPS15L1Q9UBC2 864 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 KCNG1Q9UIX4 513 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 CA14Q9ULX7 337 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 NUB1Q9Y5A7 615 aa17.51■□□□□ 0.39
CD40-207ENST00000620709 GALR2O43603 387 aaPredicted RBP17.5■□□□□ 0.39
CD40-207ENST00000620709 XYLBO75191 536 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 KRT18P05783 430 aaKnown RBP17.5■□□□□ 0.39
CD40-207ENST00000620709 HNRNPA1P09651 372 aaKnown RBP eCLIP17.5■□□□□ 0.39
CD40-207ENST00000620709 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
CD40-207ENST00000620709 LAMP2P13473 410 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 PROZP22891 400 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 RAB33AQ14088 237 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
CD40-207ENST00000620709 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 CD300LGQ6UXG3 332 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 RSPO2Q6UXX9 243 aaPredicted RBP17.5■□□□□ 0.39
CD40-207ENST00000620709 ANKS3Q6ZW76 656 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 GPBP1Q86WP2 473 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 SLC44A3Q8N4M1 653 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 MLKLQ8NB16 471 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 C7orf25Q9BPX7 421 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 MTRRQ9UBK8 725 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 CITO14578 2027 aa17.5■□□□□ 0.39
CD40-207ENST00000620709 DOCK6Q96HP0 2047 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms